PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85101-85150 / 86044 show all
rpoplin-dv42INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
60.0000
20200
rpoplin-dv42INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
rpoplin-dv42INDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
31.6092
119011900
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9174
10100
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3607
10100
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9149
10100
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2143
10100
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.5467
100.0000
99.0975
80.6361
549054954
80.0000
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9928
10100
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9820
10100
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
86.9565
20210
0.0000
rpoplin-dv42INDELI1_5map_l100_m0_e0hetalt
90.0000
100.0000
81.8182
94.7368
90920
0.0000
rpoplin-dv42INDELI1_5map_l125_m0_e0hetalt
80.0000
100.0000
66.6667
96.2733
40420
0.0000
rpoplin-dv42INDELI1_5map_l125_m0_e0homalt
99.1304
100.0000
98.2759
85.5721
114011421
50.0000
rpoplin-dv42INDELI1_5map_l125_m1_e0hetalt
91.8919
100.0000
85.0000
94.2029
1701730
0.0000
rpoplin-dv42INDELI1_5map_l125_m2_e0hetalt
92.6829
100.0000
86.3636
94.4862
1901930
0.0000
rpoplin-dv42INDELI1_5map_l125_m2_e1hetalt
92.6829
100.0000
86.3636
94.6860
1901930
0.0000
rpoplin-dv42INDELI1_5map_l150_m0_e0hetalt
85.7143
100.0000
75.0000
96.7480
30310
0.0000
rpoplin-dv42INDELI1_5map_l150_m0_e0homalt
99.2593
100.0000
98.5294
88.9610
6706711
100.0000
rpoplin-dv42INDELI1_5map_l150_m1_e0hetalt
90.0000
100.0000
81.8182
95.9707
90920
0.0000
rpoplin-dv42INDELI1_5map_l150_m2_e0hetalt
90.0000
100.0000
81.8182
96.5839
90920
0.0000
rpoplin-dv42INDELI1_5map_l150_m2_e1hetalt
90.9091
100.0000
83.3333
96.4392
1001020
0.0000
rpoplin-dv42INDELI1_5map_l250_m0_e0*
96.0000
100.0000
92.3077
97.7253
2402420
0.0000
rpoplin-dv42INDELI1_5map_l250_m0_e0het
96.7742
100.0000
93.7500
97.8495
1501510
0.0000
rpoplin-dv42INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.1787
90900
rpoplin-dv42INDELI1_5map_l250_m1_e0hetalt
80.0000
100.0000
66.6667
98.1481
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e0hetalt
80.0000
100.0000
66.6667
98.5366
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e1hetalt
80.0000
100.0000
66.6667
98.5714
20210
0.0000
rpoplin-dv42INDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
59.2593
2202200
rpoplin-dv42INDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
55.5556
80800
rpoplin-dv42INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
66.6667
10100
rpoplin-dv42INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
60.6061
1301300
rpoplin-dv42INDELI6_15HG002compoundhethomalt
48.8189
100.0000
32.2917
75.1295
310316565
100.0000
rpoplin-dv42INDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
rpoplin-dv42INDELI6_15func_cdshomalt
96.7742
100.0000
93.7500
36.0000
1501511
100.0000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
57.2464
5905900
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
10000
rpoplin-dv42INDELI6_15map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
88.5714
40400
rpoplin-dv42INDELI6_15map_l100_m1_e0hetalt
97.7778
100.0000
95.6522
77.6699
2202210
0.0000
rpoplin-dv42INDELI6_15map_l100_m2_e0hetalt
97.7778
100.0000
95.6522
79.4643
2202210
0.0000
rpoplin-dv42INDELI6_15map_l100_m2_e1hetalt
97.7778
100.0000
95.6522
80.3419
2202210
0.0000
rpoplin-dv42INDELI6_15map_l125_m1_e0hetalt
94.1176
100.0000
88.8889
83.9286
80810
0.0000
rpoplin-dv42INDELI6_15map_l125_m2_e0hetalt
94.1176
100.0000
88.8889
86.3636
80810
0.0000
rpoplin-dv42INDELI6_15map_l125_m2_e1hetalt
94.1176
100.0000
88.8889
86.9565
80810
0.0000
rpoplin-dv42INDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.1053
30300
rpoplin-dv42INDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.3333
30300
rpoplin-dv42INDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
93.7500
30300
rpoplin-dv42INDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
rpoplin-dv42INDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
rpoplin-dv42INDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
40.0000
30300