PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84901-84950 / 86044 show all
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1*
100.0000
100.0000
100.0000
96.5986
50500
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
96.5517
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSsegduphet
96.1039
100.0000
92.5000
93.3775
3703733
100.0000
rpoplin-dv42INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
94.5946
1201200
rpoplin-dv42INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
rpoplin-dv42INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
rpoplin-dv42INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9439
40400
rpoplin-dv42INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9601
20200
rpoplin-dv42INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6700
10100
rpoplin-dv42INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9450
10100
rpoplin-dv42INDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
rpoplin-dv42INDELD1_5func_cdshet
100.0000
100.0000
100.0000
45.9119
8508600
rpoplin-dv42INDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3333
10100
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5893
20200
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.1132
10100
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5781
20200
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.5075
10100
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8261
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9991
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9907
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
64.8649
1301300
rpoplin-dv42INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.5714
30300
rpoplin-dv42INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.8304
20200
rpoplin-dv42INDELD1_5map_l150_m0_e0homalt
99.4152
100.0000
98.8372
90.7427
8508511
100.0000
rpoplin-dv42INDELD1_5map_l250_m0_e0homalt
96.2963
100.0000
92.8571
97.1074
1301311
100.0000
rpoplin-dv42INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.5075
30300
rpoplin-dv42INDELD1_5map_l250_m1_e0homalt
99.1304
100.0000
98.2759
94.3580
5705711
100.0000
rpoplin-dv42INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.7179
30300
rpoplin-dv42INDELD1_5map_l250_m2_e0homalt
99.1736
100.0000
98.3607
94.7952
6006011
100.0000
rpoplin-dv42INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7448
30300
rpoplin-dv42INDELD1_5map_l250_m2_e1homalt
99.1736
100.0000
98.3607
94.9670
6006011
100.0000
rpoplin-dv42INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9937
10100
rpoplin-dv42INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9898
10100
rpoplin-dv42INDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
44.1176
1901900
rpoplin-dv42INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
42.8571
80800
rpoplin-dv42INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
rpoplin-dv42INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
90900
rpoplin-dv42INDELD6_15decoy*
100.0000
100.0000
100.0000
99.9005
10100
rpoplin-dv42INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
98.9474
10100
rpoplin-dv42INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
rpoplin-dv42INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
75.0000
100.0000
60.0000
96.4789
30322
100.0000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
97.6562
20211
100.0000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
85.7143
10111
100.0000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.5920
7407400
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.7056
60600