PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7901-7950 / 86044 show all
ltrigg-rtg1INDELC6_15HG002complexvarhomalt
0.0000
0.0000
98.1132
91.7574
005211
100.0000
ltrigg-rtg1INDELC6_15HG002compoundhet*
0.0000
0.0000
97.7778
86.8677
0013232
66.6667
ltrigg-rtg1INDELC6_15HG002compoundhethet
0.0000
0.0000
95.0000
88.0952
001910
0.0000
ltrigg-rtg1INDELC6_15HG002compoundhethetalt
0.0000
0.0000
99.1228
86.3309
0011311
100.0000
ltrigg-rtg1INDELC6_15HG002compoundhethomalt
0.0000
0.0000
96.1538
00011
100.0000
ltrigg-rtg1INDELC6_15decoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15decoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cds*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cdshet
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cdshetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cdshomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
80.0000
97.5689
001231
33.3333
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
80.0000
97.5248
00410
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
98.0952
00421
50.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
96.0000
00400
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
93.3333
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
87.5000
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
94.9935
007700
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.5510
001800
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
95.9064
95.2710
0016472
28.5714
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
94.8718
94.2605
007440
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
95.8904
95.3115
007032
66.6667
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
100.0000
97.1429
002000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
100.0000
95.6522
00300
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
94.4444
00100
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
85.7143
00200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
92.8571
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
87.5000
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
100.0000
94.1667
001400
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
97.1698
00300
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
88.3333
00700
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
94.5946
00400
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
0.0000
0.0000
100.0000
94.2708
001100
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
96.2500
00300
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
87.7551
00600
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
96.8254
00200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
77.7778
97.8365
00721
50.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
0.0000
0.0000
80.0000
96.0630
00410
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
50.0000
99.0741
00111
100.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.2603
00200
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000