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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1007 1008 1009 1010 1011 1012 1013 1014 1015 ... 1720 1721 » 50501-50550 / 86044 show all
hfeng-pmm2	INDEL	D6_15	map_l125_m2_e0	hetalt	94.4444	89.4737	100.0000	87.3134	17	2	17	0	0
hfeng-pmm2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	93.6025	89.4737	98.1308	87.4413	119	14	105	2	0	0.0000
jlack-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	94.4444	89.4737	100.0000	72.3684	17	2	21	0	0
jlack-gatk	INDEL	D6_15	map_l125_m1_e0	hetalt	91.8919	89.4737	94.4444	84.2105	17	2	17	1	0	0.0000
jlack-gatk	INDEL	D6_15	map_l125_m2_e0	hetalt	91.8919	89.4737	94.4444	85.9375	17	2	17	1	0	0.0000
hfeng-pmm3	INDEL	D6_15	map_l100_m0_e0	hetalt	94.4444	89.4737	100.0000	81.5217	17	2	17	0	0
jlack-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	94.1959	89.4737	99.4444	63.3401	340	40	358	2	1	50.0000
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	94.4444	89.4737	100.0000	70.4225	17	2	21	0	0
jli-custom	INDEL	D16_PLUS	map_l100_m0_e0	het	91.7369	89.4737	94.1176	95.4667	17	2	16	1	0	0.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
cchapple-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	93.7240	89.4737	98.3983	44.3222	663	78	1843	30	21	70.0000
cchapple-custom	INDEL	D6_15	map_l125_m1_e0	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
cchapple-custom	INDEL	D6_15	map_l125_m2_e0	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
cchapple-custom	INDEL	I1_5	map_l125_m2_e0	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
cchapple-custom	INDEL	I1_5	map_l125_m2_e1	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
ckim-dragen	INDEL	D16_PLUS	HG002complexvar	hetalt	92.9712	89.4737	96.7532	47.3804	221	26	447	15	15	100.0000
ckim-dragen	INDEL	D16_PLUS	map_l100_m0_e0	het	74.6228	89.4737	64.0000	97.0449	17	2	16	9	1	11.1111
ckim-dragen	INDEL	D6_15	map_l100_m0_e0	hetalt	94.4444	89.4737	100.0000	79.7619	17	2	17	0	0
ckim-dragen	INDEL	D6_15	map_l125_m1_e0	hetalt	94.4444	89.4737	100.0000	82.2917	17	2	17	0	0
ckim-dragen	INDEL	D6_15	map_l125_m2_e0	hetalt	94.4444	89.4737	100.0000	84.5455	17	2	17	0	0
ckim-gatk	INDEL	*	map_siren	hetalt	94.4444	89.4737	100.0000	86.4930	221	26	223	0	0
hfeng-pmm1	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	93.1872	89.4737	97.2222	86.9407	119	14	105	3	0	0.0000
astatham-gatk	INDEL	D16_PLUS	map_l100_m0_e0	het	84.4720	89.4737	80.0000	97.0545	17	2	16	4	0	0.0000
asubramanian-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	92.7273	89.4737	96.2264	99.5017	51	6	51	2	0	0.0000
asubramanian-gatk	INDEL	D6_15	map_l100_m0_e0	hetalt	94.4444	89.4737	100.0000	83.6364	17	2	18	0	0
asubramanian-gatk	INDEL	D6_15	map_l125_m1_e0	hetalt	94.4444	89.4737	100.0000	86.1789	17	2	17	0	0
asubramanian-gatk	INDEL	D6_15	map_l125_m2_e0	hetalt	94.4444	89.4737	100.0000	87.6812	17	2	17	0	0
bgallagher-sentieon	INDEL	D16_PLUS	HG002complexvar	hetalt	93.0557	89.4737	96.9365	48.0682	221	26	443	14	14	100.0000
mlin-fermikit	INDEL	D1_5	tech_badpromoters	*	91.8919	89.4737	94.4444	37.9310	17	2	17	1	1	100.0000
raldana-dualsentieon	INDEL	D16_PLUS	map_l100_m0_e0	het	86.7624	89.4737	84.2105	95.1157	17	2	16	3	0	0.0000
raldana-dualsentieon	INDEL	D6_15	map_l100_m0_e0	hetalt	94.4444	89.4737	100.0000	76.7123	17	2	17	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m1_e0	hetalt	94.4444	89.4737	100.0000	79.2683	17	2	17	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m2_e0	hetalt	94.4444	89.4737	100.0000	81.5217	17	2	17	0	0
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	92.7807	89.4737	96.3415	89.6985	85	10	79	3	0	0.0000
qzeng-custom	INDEL	D6_15	map_l100_m0_e0	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
qzeng-custom	INDEL	D6_15	map_l125_m1_e0	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
qzeng-custom	INDEL	D6_15	map_l125_m2_e0	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
ndellapenna-hhga	INDEL	D16_PLUS	map_l100_m0_e0	het	85.4749	89.4737	81.8182	90.9836	17	2	18	4	0	0.0000
ndellapenna-hhga	INDEL	D1_5	tech_badpromoters	*	91.8919	89.4737	94.4444	45.4545	17	2	17	1	1	100.0000
rpoplin-dv42	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	93.5780	89.4737	98.0769	99.4056	51	6	51	1	1	100.0000
rpoplin-dv42	INDEL	D6_15	map_l100_m0_e0	hetalt	94.4444	89.4737	100.0000	83.1683	17	2	17	0	0
rpoplin-dv42	INDEL	I6_15	map_l100_m1_e0	*	93.1507	89.4737	97.1429	84.5133	102	12	102	3	2	66.6667
egarrison-hhga	INDEL	D16_PLUS	map_l100_m0_e0	het	85.4749	89.4737	81.8182	90.4348	17	2	18	4	2	50.0000
dgrover-gatk	INDEL	D16_PLUS	map_l100_m0_e0	het	82.2995	89.4737	76.1905	96.8278	17	2	16	5	0	0.0000
ckim-vqsr	INDEL	*	map_siren	hetalt	94.4444	89.4737	100.0000	86.4930	221	26	223	0	0
ckim-isaac	INDEL	D1_5	tech_badpromoters	*	94.4444	89.4737	100.0000	32.0000	17	2	17	0	0
ckim-isaac	INDEL	I16_PLUS	segdup	homalt	94.4444	89.4737	100.0000	81.5217	17	2	17	0	0
eyeh-varpipe	INDEL	*	tech_badpromoters	*	91.9970	89.4737	94.6667	86.9110	68	8	71	4	4	100.0000
eyeh-varpipe	INDEL	D1_5	tech_badpromoters	*	89.4737	89.4737	89.4737	42.4242	17	2	17	2	2	100.0000
gduggal-snapfb	INDEL	D1_5	tech_badpromoters	*	91.8919	89.4737	94.4444	57.1429	17	2	17	1	1	100.0000

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