PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4801-4850 / 86044 show all
gduggal-bwafbSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.4286
20200
gduggal-bwafbSNP*map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
80.9524
1601600
gduggal-bwafbSNP*map_l100_m1_e0hetalt
98.7654
97.5610
100.0000
76.3314
4014000
gduggal-bwafbSNP*map_l100_m2_e0hetalt
98.7952
97.6190
100.0000
78.0749
4114100
gduggal-bwafbSNP*map_l100_m2_e1hetalt
98.8235
97.6744
100.0000
77.6596
4214200
gduggal-bwafbSNP*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
86.1538
90900
gduggal-bwafbSNP*map_l125_m1_e0hetalt
98.3051
96.6667
100.0000
76.9841
2912900
gduggal-bwafbSNP*map_l125_m2_e0hetalt
98.3051
96.6667
100.0000
79.7203
2912900
gduggal-bwafbSNP*map_l125_m2_e1hetalt
98.3051
96.6667
100.0000
79.7203
2912900
gduggal-bwafbSNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.4444
30300
gduggal-bwafbSNP*map_l150_m1_e0hetalt
97.4359
95.0000
100.0000
82.4074
1911900
gduggal-bwafbSNP*map_l150_m2_e0hetalt
97.4359
95.0000
100.0000
83.8983
1911900
gduggal-bwafbSNP*map_l150_m2_e1hetalt
97.4359
95.0000
100.0000
84.0336
1911900
gduggal-bwafbSNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
93.5484
40400
gduggal-bwafbSNP*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
92.7536
50500
gduggal-bwafbSNP*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
92.7536
50500
gduggal-bwafbSNP*map_sirenhetalt
98.7500
97.5309
100.0000
72.9452
7927900
gduggal-bwafbSNP*segduphetalt
100.0000
100.0000
100.0000
98.1579
70700
gduggal-bwafbSNP*tech_badpromotershomalt
100.0000
100.0000
100.0000
52.3810
8008000
gduggal-bwafbSNPtiHG002compoundhethetalt
99.9136
99.8273
100.0000
23.3422
578157800
gduggal-bwafbSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
57.8947
80800
gduggal-bwafbSNPtifunc_cdshomalt
99.9716
99.9431
100.0000
21.6059
52723527200
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.7273
1201200
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.7500
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.1538
20200
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
92.7273
1201200
gduggal-bwafbSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.8333
10100
gduggal-bwafbSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.7914
60600
gduggal-bwafbSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
84.6154
20200
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
75.0000
10100
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
97.4074
80700
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.8541
60500
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
94.5946
20200
gduggal-bwafbSNPtimap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
76.2712
1401400
gduggal-bwafbSNPtimap_l100_m1_e0hetalt
100.0000
100.0000
100.0000
73.6364
2902900
gduggal-bwafbSNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
75.2066
3003000
gduggal-bwafbSNPtimap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
74.5902
3103100
gduggal-bwafbSNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
80.9524
80800
gduggal-bwafbSNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
70.3704
2402400
gduggal-bwafbSNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
74.7368
2402400
gduggal-bwafbSNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
74.7368
2402400
gduggal-bwafbSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.9091
30300
gduggal-bwafbSNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
77.2727
1501500
gduggal-bwafbSNPtimap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
80.0000
1501500
gduggal-bwafbSNPtimap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
80.2632
1501500
gduggal-bwafbSNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
89.1892
40400
gduggal-bwafbSNPtimap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
88.0952
50500