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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 893 894 895 896 897 898 899 900 901 ... 1720 1721 » 44801-44850 / 86044 show all
mlin-fermikit	INDEL	I16_PLUS	map_siren	het	81.2500	79.5918	82.9787	86.6856	39	10	39	8	5	62.5000
qzeng-custom	INDEL	C1_5	HG002compoundhet	het	0.0000	0.0000	82.9787	90.9615	0	0	39	8	0	0.0000
mlin-fermikit	INDEL	D1_5	map_l250_m2_e0	*	56.5892	42.9348	82.9787	91.5996	79	105	78	16	14	87.5000
mlin-fermikit	INDEL	D1_5	map_l250_m2_e1	*	56.3873	42.7027	82.9787	91.9105	79	106	78	16	14	87.5000
jlack-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	88.6364	95.1220	82.9787	75.1323	78	4	78	16	16	100.0000
ltrigg-rtg2	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	het	80.0241	77.2727	82.9787	93.9040	51	15	39	8	2	25.0000
gduggal-snapvard	INDEL	*	map_l100_m2_e1	*	85.8099	88.8445	82.9757	86.6598	3337	419	4601	944	443	46.9280
gduggal-snapplat	INDEL	*	map_l150_m0_e0	het	78.1739	73.9003	82.9721	96.4230	252	89	268	55	9	16.3636
ghariani-varprowl	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	89.5968	97.3744	82.9698	74.5108	4710	127	4755	976	140	14.3443
mlin-fermikit	SNP	*	map_l125_m0_e0	*	52.1003	37.9727	82.9686	58.9613	7361	12024	7356	1510	1338	88.6093
ciseli-custom	SNP	*	map_l250_m1_e0	homalt	80.5510	78.2785	82.9594	86.9401	1928	535	1923	395	279	70.6329
jmaeng-gatk	INDEL	*	map_l250_m0_e0	*	87.9518	93.5897	82.9545	98.5586	73	5	73	15	2	13.3333
mlin-fermikit	INDEL	I1_5	map_l125_m2_e1	homalt	71.2146	62.3907	82.9457	78.9731	214	129	214	44	42	95.4545
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e1	het	81.1906	79.5082	82.9457	97.9666	97	25	107	22	5	22.7273
gduggal-snapvard	SNP	*	map_l150_m1_e0	het	89.3113	96.7385	82.9433	83.9813	18686	630	18464	3797	256	6.7422
ghariani-varprowl	INDEL	*	map_l250_m2_e1	*	87.8531	93.3934	82.9333	98.2167	311	22	311	64	12	18.7500
jlack-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	90.6706	100.0000	82.9333	68.7239	311	0	311	64	63	98.4375
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	0.0000	0.0000	82.9268	96.4777	0	0	34	7	4	57.1429
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	0.0000	0.0000	82.9268	96.4777	0	0	34	7	4	57.1429
ghariani-varprowl	INDEL	D6_15	map_l150_m2_e1	*	81.4371	80.0000	82.9268	93.5433	68	17	68	14	13	92.8571
mlin-fermikit	INDEL	I6_15	map_l125_m1_e0	*	71.1252	62.2642	82.9268	83.4677	33	20	34	7	6	85.7143
mlin-fermikit	INDEL	I6_15	map_l125_m2_e0	*	71.1252	62.2642	82.9268	86.1017	33	20	34	7	6	85.7143
mlin-fermikit	INDEL	I6_15	map_l125_m2_e1	*	71.1252	62.2642	82.9268	86.6013	33	20	34	7	6	85.7143
ciseli-custom	INDEL	I1_5	map_siren	homalt	62.7683	50.4950	82.9235	77.4631	612	600	607	125	97	77.6000
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	80.5396	78.3026	82.9082	65.7841	978	271	975	201	201	100.0000
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	80.5396	78.3026	82.9082	65.7841	978	271	975	201	201	100.0000
qzeng-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	*	83.9455	85.0094	82.9080	59.5221	2257	398	3216	663	302	45.5505
gduggal-bwavard	INDEL	I1_5	map_l250_m1_e0	*	87.4195	92.4528	82.9060	96.3265	98	8	97	20	5	25.0000
gduggal-bwavard	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	72.0146	63.6573	82.8979	66.4923	2482	1417	2443	504	406	80.5556
gduggal-snapvard	INDEL	*	map_l100_m1_e0	*	85.9341	89.2080	82.8920	85.9643	3199	387	4414	911	427	46.8716
gduggal-snapvard	SNP	*	map_l150_m0_e0	*	88.5661	95.0964	82.8750	85.4707	11442	590	11300	2335	147	6.2955
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	85.8513	89.0547	82.8704	80.0000	179	22	179	37	34	91.8919
eyeh-varpipe	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	66.9909	56.2201	82.8667	28.6733	235	183	1243	257	257	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	70.8362	61.8574	82.8641	49.8157	373	230	677	140	133	95.0000
anovak-vg	INDEL	D1_5	map_siren	het	86.2774	89.9868	82.8617	80.2332	2049	228	2079	430	142	33.0233
gduggal-snapfb	INDEL	I6_15	func_cds	*	74.3590	67.4419	82.8571	33.9623	29	14	29	6	6	100.0000
gduggal-snapplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	65.1353	53.6585	82.8571	85.6026	198	171	290	60	5	8.3333
gduggal-snapplat	INDEL	D1_5	map_l250_m0_e0	het	80.7713	78.7879	82.8571	98.8267	26	7	29	6	0	0.0000
cchapple-custom	INDEL	D16_PLUS	map_l100_m1_e0	het	84.8574	86.9565	82.8571	91.8320	40	6	58	12	7	58.3333
gduggal-bwaplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	58.9260	45.7207	82.8571	79.6003	609	723	609	126	21	16.6667
gduggal-snapfb	INDEL	*	tech_badpromoters	*	78.7330	75.0000	82.8571	54.8387	57	19	58	12	2	16.6667
eyeh-varpipe	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	35.9600	22.9630	82.8571	58.3333	31	104	29	6	3	50.0000
ghariani-varprowl	INDEL	*	map_l250_m2_e0	*	87.7841	93.3535	82.8418	98.1723	309	22	309	64	12	18.7500
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	71.4799	62.8596	82.8402	34.4961	743	439	140	29	29	100.0000
eyeh-varpipe	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	86.6959	90.9333	82.8358	66.4682	2728	272	3219	667	620	92.9535
dgrover-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	86.7725	91.1111	82.8283	95.1111	82	8	82	17	4	23.5294
mlin-fermikit	INDEL	D6_15	map_l125_m1_e0	*	74.9115	68.3761	82.8283	83.9286	80	37	82	17	11	64.7059
raldana-dualsentieon	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	80.2236	77.7778	82.8283	72.1910	105	30	82	17	16	94.1176
anovak-vg	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	63.7080	51.7647	82.8154	52.5585	440	410	453	94	66	70.2128
gduggal-snapfb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	89.1553	96.5499	82.8127	57.5437	5485	196	5488	1139	1055	92.6251

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