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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 814 815 816 817 818 819 820 821 822 ... 1720 1721 » 40851-40900 / 86044 show all
raldana-dualsentieon	INDEL	D16_PLUS	map_l125_m2_e1	het	92.6829	95.0000	90.4762	95.2381	19	1	19	2	0	0.0000
ndellapenna-hhga	INDEL	D6_15	map_l125_m2_e0	het	93.0501	95.7746	90.4762	89.6552	68	3	76	8	4	50.0000
ndellapenna-hhga	INDEL	D6_15	map_l125_m2_e1	het	93.0501	95.7746	90.4762	89.8673	68	3	76	8	4	50.0000
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	92.1212	93.8272	90.4762	75.3666	76	5	76	8	7	87.5000
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	84.4444	79.1667	90.4762	80.0000	19	5	19	2	2	100.0000
rpoplin-dv42	INDEL	I6_15	map_l150_m1_e0	*	82.6087	76.0000	90.4762	93.9828	19	6	19	2	2	100.0000
rpoplin-dv42	INDEL	I6_15	map_l150_m2_e0	*	82.6087	76.0000	90.4762	94.6154	19	6	19	2	2	100.0000
rpoplin-dv42	INDEL	D16_PLUS	map_l100_m1_e0	het	86.3636	82.6087	90.4762	90.4328	38	8	38	4	2	50.0000
cchapple-custom	INDEL	D6_15	map_l250_m1_e0	*	95.0000	100.0000	90.4762	95.4936	18	0	19	2	0	0.0000
gduggal-snapplat	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	50.4626	34.9887	90.4762	43.6782	155	288	133	14	11	78.5714
gduggal-snapplat	INDEL	I1_5	func_cds	homalt	83.8633	78.1513	90.4762	30.4636	93	26	95	10	1	10.0000
gduggal-snapfb	INDEL	I6_15	map_l150_m2_e1	*	79.1667	70.3704	90.4762	90.5830	19	8	19	2	2	100.0000
hfeng-pmm1	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	92.6829	95.0000	90.4762	99.2580	19	1	19	2	0	0.0000
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	67.5127	53.8462	90.4762	72.7273	21	18	19	2	2	100.0000
egarrison-hhga	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	67.6759	54.0541	90.4762	58.8235	20	17	19	2	2	100.0000
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	76.7677	66.6667	90.4762	88.3978	18	9	19	2	2	100.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m1_e0	het	92.6829	95.0000	90.4762	96.8563	19	1	19	2	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m2_e0	het	92.6829	95.0000	90.4762	97.3384	19	1	19	2	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m2_e1	het	92.6829	95.0000	90.4762	97.4074	19	1	19	2	0	0.0000
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	91.5663	92.6829	90.4762	89.2308	38	3	38	4	4	100.0000
eyeh-varpipe	INDEL	C1_5	map_l125_m0_e0	*	0.0000	0.0000	90.4762	96.7643	0	0	19	2	0	0.0000
eyeh-varpipe	INDEL	D1_5	map_l125_m2_e0	hetalt	72.1519	60.0000	90.4762	95.0237	9	6	19	2	1	50.0000
eyeh-varpipe	INDEL	D1_5	map_l125_m2_e1	hetalt	72.1519	60.0000	90.4762	95.1501	9	6	19	2	1	50.0000
ltrigg-rtg1	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	*	80.8511	73.0769	90.4762	94.8655	19	7	19	2	1	50.0000
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	91.5663	92.6829	90.4762	73.2484	38	3	38	4	4	100.0000
jlack-gatk	INDEL	D16_PLUS	map_l125_m1_e0	het	92.6829	95.0000	90.4762	97.1583	19	1	19	2	0	0.0000
jlack-gatk	INDEL	D16_PLUS	map_l125_m2_e0	het	92.6829	95.0000	90.4762	97.6000	19	1	19	2	0	0.0000
jlack-gatk	INDEL	D16_PLUS	map_l125_m2_e1	het	92.6829	95.0000	90.4762	97.6510	19	1	19	2	0	0.0000
jlack-gatk	INDEL	D1_5	tech_badpromoters	*	95.0000	100.0000	90.4762	48.7805	19	0	19	2	0	0.0000
jlack-gatk	INDEL	I16_PLUS	map_siren	homalt	90.4762	90.4762	90.4762	95.1276	19	2	19	2	1	50.0000
hfeng-pmm2	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	92.6829	95.0000	90.4762	99.2519	19	1	19	2	0	0.0000
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m1_e0	het	92.6829	95.0000	90.4762	95.0000	19	1	19	2	0	0.0000
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m2_e0	het	92.6829	95.0000	90.4762	95.6790	19	1	19	2	0	0.0000
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m2_e1	het	92.6829	95.0000	90.4762	95.7831	19	1	19	2	0	0.0000
hfeng-pmm3	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	93.4426	96.6102	90.4762	76.4045	57	2	57	6	6	100.0000
jpowers-varprowl	INDEL	*	HG002complexvar	het	92.4718	94.5577	90.4760	57.5873	43697	2515	43680	4598	4462	97.0422
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	92.6668	94.9700	90.4727	59.4634	1265	67	1244	131	94	71.7557
qzeng-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	91.7774	93.1267	90.4666	45.7994	691	51	4033	425	374	88.0000
mlin-fermikit	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	92.3449	94.3042	90.4654	62.2051	1606	97	1594	168	164	97.6190
jlack-gatk	SNP	tv	map_l150_m1_e0	*	94.3885	98.6712	90.4622	83.2378	10767	145	10765	1135	67	5.9031
jmaeng-gatk	INDEL	*	segdup	het	94.5277	98.9768	90.4613	96.5263	1451	15	1451	153	2	1.3072
gduggal-snapplat	SNP	tv	map_l250_m2_e1	het	86.0422	82.0356	90.4602	95.1420	1612	353	1612	170	70	41.1765
gduggal-bwavard	SNP	tv	map_l150_m2_e0	*	94.0699	97.9833	90.4572	83.2501	11126	229	11100	1171	50	4.2699
ghariani-varprowl	INDEL	D1_5	segdup	*	91.2316	92.0218	90.4550	95.5776	1015	88	1014	107	65	60.7477
eyeh-varpipe	SNP	*	HG002compoundhet	het	94.4229	98.7586	90.4519	56.9085	14002	176	5845	617	93	15.0729
jlack-gatk	INDEL	I1_5	map_l100_m0_e0	het	94.1469	98.1595	90.4494	90.9645	320	6	322	34	1	2.9412
mlin-fermikit	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.8031	99.5995	90.4474	84.6880	1492	6	1496	158	129	81.6456
jmaeng-gatk	INDEL	D1_5	map_l150_m0_e0	*	94.0364	97.9239	90.4459	94.1809	283	6	284	30	1	3.3333
ghariani-varprowl	INDEL	I1_5	map_l100_m2_e1	het	94.1953	98.2716	90.4437	90.5024	796	14	795	84	29	34.5238
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	93.5361	96.8504	90.4412	37.6147	123	4	123	13	12	92.3077

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