PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
3601-3650 / 86044 show all | |||||||||||||||
| ltrigg-rtg1 | INDEL | C1_5 | map_l100_m2_e1 | * | 0.0000 | 0.0000 | 100.0000 | 97.2037 | 0 | 0 | 21 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l100_m2_e1 | het | 0.0000 | 0.0000 | 100.0000 | 96.5714 | 0 | 0 | 12 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l100_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 97.1223 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l100_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.0916 | 0 | 0 | 5 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 100.0000 | 98.1567 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m0_e0 | het | 0.0000 | 0.0000 | 100.0000 | 98.8889 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 96.9697 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.8723 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m1_e0 | * | 0.0000 | 0.0000 | 100.0000 | 97.0464 | 0 | 0 | 14 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m1_e0 | het | 0.0000 | 0.0000 | 100.0000 | 96.1353 | 0 | 0 | 8 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 97.5000 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.8610 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e0 | * | 0.0000 | 0.0000 | 100.0000 | 97.4217 | 0 | 0 | 14 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e0 | het | 0.0000 | 0.0000 | 100.0000 | 96.7480 | 0 | 0 | 8 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 97.8723 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.0296 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e1 | * | 0.0000 | 0.0000 | 100.0000 | 97.4684 | 0 | 0 | 14 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e1 | het | 0.0000 | 0.0000 | 100.0000 | 96.8000 | 0 | 0 | 8 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 97.8947 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l125_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.0769 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m0_e0 | * | 0.0000 | 0.0000 | 100.0000 | 98.1818 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 96.1538 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.2973 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m1_e0 | * | 0.0000 | 0.0000 | 100.0000 | 98.3740 | 0 | 0 | 6 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m1_e0 | het | 0.0000 | 0.0000 | 100.0000 | 98.7500 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.1818 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.0519 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e0 | * | 0.0000 | 0.0000 | 100.0000 | 98.5612 | 0 | 0 | 6 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e0 | het | 0.0000 | 0.0000 | 100.0000 | 98.9362 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.4615 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.1707 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e1 | * | 0.0000 | 0.0000 | 100.0000 | 98.3529 | 0 | 0 | 7 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e1 | het | 0.0000 | 0.0000 | 100.0000 | 98.4375 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.4848 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.2036 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 97.1429 | 0 | 0 | 11 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | segdup | * | 0.0000 | 0.0000 | 100.0000 | 99.4494 | 0 | 0 | 8 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | segdup | het | 0.0000 | 0.0000 | 100.0000 | 99.5658 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | segdup | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.6479 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C1_5 | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 99.1632 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 96.0000 | 0 | 0 | 4 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 95.3073 | 1 | 0 | 168 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | het | 100.0000 | 100.0000 | 100.0000 | 94.4147 | 1 | 0 | 73 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 100.0000 | 94.9935 | 0 | 0 | 77 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 97.5510 | 0 | 0 | 18 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.1429 | 0 | 0 | 20 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 100.0000 | 95.6522 | 0 | 0 | 3 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 100.0000 | 94.4444 | 0 | 0 | 1 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 85.7143 | 0 | 0 | 2 | 0 | 0 | ||
| ltrigg-rtg1 | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | * | 0.0000 | 0.0000 | 100.0000 | 94.1667 | 0 | 0 | 14 | 0 | 0 | ||