PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
2151-2200 / 86044 show all
ltrigg-rtg2INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg2INDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
24.6835
119011900
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
97.6492
95.4064
100.0000
61.3043
2701326700
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9003
10100
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7500
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.4772
97.0000
100.0000
56.4626
194619200
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8994
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7179
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.4742
98.9540
100.0000
69.2510
473546800
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
99.1597
98.3333
100.0000
88.4157
5916800
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7101
99.4220
100.0000
73.1707
344234100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
95.5414
91.4634
100.0000
66.2100
7577400
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
92.0000
85.1852
100.0000
72.8261
2342500
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.6891
99.3802
100.0000
59.1393
962695900
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9942
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9910
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
96.0000
10200
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
95.4545
91.3043
100.0000
37.1429
2122200
ltrigg-rtg2INDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
96.1538
901000
ltrigg-rtg2INDELI1_5map_l100_m1_e0hetalt
93.9759
88.6364
100.0000
93.3227
3954200
ltrigg-rtg2INDELI1_5map_l100_m2_e0hetalt
93.9759
88.6364
100.0000
93.8053
3954200
ltrigg-rtg2INDELI1_5map_l100_m2_e1hetalt
94.1176
88.8889
100.0000
93.7591
4054300
ltrigg-rtg2INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.3822
40500
ltrigg-rtg2INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
95.4654
1701900
ltrigg-rtg2INDELI1_5map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
95.7627
1812000
ltrigg-rtg2INDELI1_5map_l125_m2_e1hetalt
97.2973
94.7368
100.0000
95.7983
1812000
ltrigg-rtg2INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3510
30400
ltrigg-rtg2INDELI1_5map_l150_m0_e0homalt
99.2481
98.5075
100.0000
83.5476
6616400
ltrigg-rtg2INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.7320
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
97.1591
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.9274
1001100
ltrigg-rtg2INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.1860
901000
ltrigg-rtg2INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.9011
20200
ltrigg-rtg2INDELI1_5map_l250_m1_e0homalt
98.8506
97.7273
100.0000
91.7625
4314300
ltrigg-rtg2INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0868
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e0homalt
98.8764
97.7778
100.0000
93.0599
4414400
ltrigg-rtg2INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0991
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e1homalt
98.9011
97.8261
100.0000
93.1087
4514500
ltrigg-rtg2INDELI1_5map_sirenhetalt
98.1818
96.4286
100.0000
92.1300
108410900
ltrigg-rtg2INDELI1_5segduphetalt
100.0000
100.0000
100.0000
96.8447
4805200
ltrigg-rtg2INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg2INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg2INDELI6_15func_cds*
98.8235
97.6744
100.0000
33.3333
4214200
ltrigg-rtg2INDELI6_15func_cdshet
100.0000
100.0000
100.0000
34.2857
2402300
ltrigg-rtg2INDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
42.8571
31400
ltrigg-rtg2INDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
28.5714
1501500
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
94.8276
90.1639
100.0000
55.6452
5565500
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.1053
3603600
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.5904
95.2941
100.0000
62.7193
8148500