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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 416 417 418 419 420 421 422 423 424 ... 1720 1721 » 20951-21000 / 86044 show all
rpoplin-dv42	INDEL	D1_5	*	het	99.5696	99.7077	99.4320	57.4420	87318	256	87348	499	434	86.9739
hfeng-pmm1	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	*	96.7867	94.2786	99.4318	62.0564	2274	138	2275	13	7	53.8462
hfeng-pmm1	INDEL	D1_5	map_l250_m2_e0	*	97.2222	95.1087	99.4318	94.0999	175	9	175	1	0	0.0000
astatham-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	*	96.6851	94.0860	99.4318	71.0526	175	11	175	1	1	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.0079	98.5876	99.4318	70.3953	349	5	350	2	1	50.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.1501	98.8701	99.4318	73.9645	175	2	175	1	0	0.0000
cchapple-custom	INDEL	I1_5	map_l100_m2_e1	homalt	98.7858	98.1481	99.4318	80.5811	530	10	525	3	2	66.6667
ltrigg-rtg1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.0560	98.6830	99.4318	77.2512	1049	14	1050	6	2	33.3333
ltrigg-rtg2	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	96.3154	93.3884	99.4318	53.2537	339	24	350	2	2	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	*	96.6851	94.0860	99.4318	71.1475	175	11	175	1	1	100.0000
gduggal-bwaplat	SNP	tv	map_l125_m1_e0	*	73.1779	57.8921	99.4316	88.1943	9272	6744	9272	53	13	24.5283
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.1938	95.0545	99.4316	25.2614	4536	236	4548	26	26	100.0000
ltrigg-rtg2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	97.6454	95.9224	99.4314	31.5401	6822	290	6820	39	39	100.0000
jli-custom	SNP	*	map_l100_m2_e0	het	99.2823	99.1336	99.4314	64.8428	45997	402	45994	263	62	23.5741
gduggal-bwaplat	SNP	*	map_l150_m2_e0	*	69.3373	53.2274	99.4313	91.0275	16954	14898	16958	97	30	30.9278
ndellapenna-hhga	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.1773	98.9247	99.4312	56.1924	1748	19	1748	10	10	100.0000
hfeng-pmm3	SNP	tv	map_l150_m1_e0	*	99.3718	99.3127	99.4310	74.1360	10837	75	10835	62	9	14.5161
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.4310	99.4310	99.4310	47.4196	699	4	699	4	3	75.0000
jmaeng-gatk	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	98.9505	98.4748	99.4309	69.9164	2970	46	2970	17	4	23.5294
rpoplin-dv42	SNP	*	map_l125_m2_e0	*	99.2517	99.0733	99.4307	70.7955	46290	433	46284	265	170	64.1509
ckim-dragen	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.3008	97.1963	99.4307	73.6236	520	15	524	3	3	100.0000
astatham-gatk	SNP	*	map_l125_m0_e0	het	89.5045	81.3803	99.4306	82.1625	10306	2358	10303	59	18	30.5085
cchapple-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.1381	98.8474	99.4304	72.0835	5060	59	5237	30	24	80.0000
cchapple-custom	INDEL	D1_5	map_l125_m2_e0	homalt	98.1888	96.9780	99.4302	83.5211	353	11	349	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	*	*	99.3810	99.3322	99.4300	61.6387	145765	980	145820	836	338	40.4306
jli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.5047	99.5794	99.4300	77.4061	6629	28	6629	38	7	18.4211
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.2046	97.0093	99.4297	73.6076	519	16	523	3	3	100.0000
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.2046	97.0093	99.4297	73.5811	519	16	523	3	3	100.0000
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	94.6297	90.2717	99.4297	29.8103	7275	784	7323	42	36	85.7143
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	94.6297	90.2717	99.4297	29.8103	7275	784	7323	42	36	85.7143
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.5181	93.7722	99.4296	26.3580	7664	509	7670	44	43	97.7273
ckim-dragen	INDEL	D1_5	*	*	99.4199	99.4105	99.4294	60.9956	145880	865	145840	837	396	47.3118
ckim-dragen	INDEL	D1_5	*	het	99.5957	99.7625	99.4294	59.4097	87366	208	87308	501	64	12.7745
ltrigg-rtg2	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.4714	99.5136	99.4293	48.5634	27823	136	27875	160	12	7.5000
gduggal-bwafb	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	98.7659	98.1114	99.4293	42.4615	4000	77	4007	23	16	69.5652
jlack-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.7138	100.0000	99.4293	53.4182	2439	0	2439	14	0	0.0000
egarrison-hhga	SNP	*	map_l250_m2_e0	het	98.3259	97.2468	99.4291	88.5758	5051	143	5051	29	11	37.9310
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.1659	93.1102	99.4290	31.4906	6622	490	6617	38	38	100.0000
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742
gduggal-bwavard	SNP	*	map_l250_m2_e1	homalt	98.2472	97.0935	99.4288	88.0788	2639	79	2611	15	10	66.6667
gduggal-bwavard	INDEL	D1_5	map_l125_m2_e1	homalt	97.5281	95.6989	99.4286	80.7692	356	16	348	2	2	100.0000
gduggal-bwaplat	INDEL	I1_5	map_l150_m1_e0	het	73.4177	58.1940	99.4286	96.2382	174	125	174	1	0	0.0000
ltrigg-rtg2	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	*	91.0540	83.9806	99.4286	47.7612	173	33	174	1	1	100.0000
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.5348	93.8046	99.4286	27.8282	10417	688	10441	60	59	98.3333
rpoplin-dv42	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	89.5684	81.4873	99.4286	37.8698	515	117	522	3	3	100.0000
bgallagher-sentieon	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	*	96.3989	93.5484	99.4286	70.8333	174	12	174	1	1	100.0000
bgallagher-sentieon	INDEL	I1_5	*	homalt	99.6433	99.8593	99.4283	55.0054	60343	85	60348	347	343	98.8473
ltrigg-rtg1	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.0900	94.8591	99.4283	33.0075	6532	354	6609	38	38	100.0000
mlin-fermikit	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	80.9710	68.2936	99.4281	31.4166	7584	3521	7649	44	44	100.0000

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