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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 359 360 361 362 363 364 365 366 367 ... 1720 1721 » 18101-18150 / 86044 show all
ckim-dragen	SNP	tv	map_l100_m0_e0	homalt	99.4789	99.2720	99.6867	59.7308	3818	28	3818	12	10	83.3333
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.3190	93.1715	99.6865	67.9236	614	45	636	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.3190	93.1715	99.6865	67.9236	614	45	636	2	2	100.0000
ltrigg-rtg2	INDEL	*	segdup	homalt	99.5827	99.4792	99.6865	92.2340	955	5	954	3	3	100.0000
gduggal-bwaplat	INDEL	I1_5	map_l100_m2_e1	homalt	74.0396	58.8889	99.6865	89.4161	318	222	318	1	1	100.0000
bgallagher-sentieon	SNP	tv	HG002compoundhet	*	99.7142	99.7422	99.6862	48.7920	8900	23	8895	28	11	39.2857
rpoplin-dv42	SNP	ti	map_l150_m2_e1	homalt	99.3872	99.0901	99.6862	73.4415	7623	70	7623	24	23	95.8333
qzeng-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.5632	99.4406	99.6861	52.5328	1600	9	1588	5	3	60.0000
hfeng-pmm1	SNP	*	map_l125_m2_e0	*	99.4680	99.2509	99.6861	70.6559	46373	350	46367	146	41	28.0822
gduggal-snapfb	SNP	ti	map_l150_m2_e1	homalt	97.2023	94.8395	99.6858	79.8530	7296	397	7297	23	14	60.8696
jlack-gatk	INDEL	I1_5	HG002complexvar	het	99.5954	99.5052	99.6857	57.8787	18099	90	18080	57	28	49.1228
ckim-vqsr	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4572	99.2298	99.6856	78.8294	6055	47	6025	19	12	63.1579
ltrigg-rtg2	INDEL	I1_5	HG002complexvar	*	99.3818	99.0798	99.6856	52.9504	33055	307	32342	102	66	64.7059
ltrigg-rtg2	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5230	99.3610	99.6855	53.7118	311	2	317	1	1	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.3185	93.1715	99.6855	68.3267	614	45	634	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.3185	93.1715	99.6855	68.3267	614	45	634	2	2	100.0000
cchapple-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6333	99.5812	99.6855	77.3934	951	4	951	3	2	66.6667
hfeng-pmm3	SNP	tv	map_l100_m1_e0	*	99.6386	99.5919	99.6854	64.5700	24401	100	24397	77	10	12.9870
ghariani-varprowl	SNP	*	map_l100_m0_e0	homalt	98.8809	98.0895	99.6851	64.3445	11398	222	11398	36	21	58.3333
rpoplin-dv42	SNP	tv	map_l100_m0_e0	homalt	99.1768	98.6739	99.6848	64.1086	3795	51	3795	12	10	83.3333
raldana-dualsentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.2643	98.8474	99.6847	73.5302	5060	59	5058	16	12	75.0000
ckim-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8420	100.0000	99.6845	55.0099	1580	0	1580	5	0	0.0000
hfeng-pmm2	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.2445	98.8084	99.6845	73.8057	5058	61	5056	16	7	43.7500
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8420	100.0000	99.6845	52.3308	1580	0	1580	5	0	0.0000
ltrigg-rtg1	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.6024	95.6055	99.6844	50.8784	2850	131	2843	9	6	66.6667
asubramanian-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.7788	99.8734	99.6843	54.0070	1578	2	1579	5	0	0.0000
astatham-gatk	INDEL	D1_5	*	homalt	99.8143	99.9448	99.6841	62.4034	48899	27	48904	155	152	98.0645
jmaeng-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.5131	99.3427	99.6841	80.0486	10730	71	10730	34	12	35.2941
rpoplin-dv42	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.6894	93.8694	99.6841	24.6230	3782	247	3787	12	12	100.0000
rpoplin-dv42	SNP	ti	map_l150_m1_e0	homalt	99.3702	99.0583	99.6841	71.0853	7258	69	7258	23	22	95.6522
ltrigg-rtg1	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1571	98.6358	99.6839	46.3252	11713	162	11670	37	13	35.1351
raldana-dualsentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.3889	99.0959	99.6837	47.2135	2521	23	2521	8	0	0.0000
hfeng-pmm1	SNP	tv	segdup	*	99.7305	99.7773	99.6837	90.5181	8513	19	8509	27	6	22.2222
ckim-isaac	SNP	tv	map_l100_m2_e0	het	79.2946	65.8300	99.6834	69.5147	10386	5391	10389	33	8	24.2424
rpoplin-dv42	SNP	*	map_l125_m0_e0	homalt	99.0933	98.5101	99.6834	69.3810	6612	100	6612	21	20	95.2381
rpoplin-dv42	SNP	tv	segdup	*	99.6835	99.6835	99.6834	91.0590	8505	27	8501	27	12	44.4444
raldana-dualsentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0343	98.3940	99.6831	76.6868	6004	98	5976	19	10	52.6316
jpowers-varprowl	SNP	*	map_l100_m1_e0	homalt	99.3441	99.0075	99.6831	63.9191	26735	268	26735	85	65	76.4706
rpoplin-dv42	SNP	ti	map_l150_m2_e0	homalt	99.3810	99.0809	99.6830	73.3835	7546	70	7546	24	23	95.8333
ckim-dragen	INDEL	I16_PLUS	HG002complexvar	het	99.0099	98.3459	99.6830	64.2493	654	11	629	2	1	50.0000
rpoplin-dv42	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.4201	99.1588	99.6829	84.8446	943	8	943	3	1	33.3333
gduggal-snapvard	SNP	ti	map_l150_m1_e0	homalt	97.5731	95.5507	99.6829	71.1266	7001	326	6916	22	18	81.8182
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.3197	98.9592	99.6829	37.2866	11314	119	11317	36	17	47.2222
ckim-vqsr	SNP	ti	func_cds	het	99.7473	99.8119	99.6828	33.7510	8488	16	8486	27	0	0.0000
jpowers-varprowl	SNP	*	map_l125_m2_e1	homalt	99.1340	98.5911	99.6828	71.9295	17285	247	17285	55	40	72.7273
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	het	99.7460	99.8094	99.6827	70.4841	3142	6	3142	10	6	60.0000
egarrison-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5246	99.3671	99.6825	48.0883	1570	10	1570	5	2	40.0000
ltrigg-rtg1	SNP	*	map_l150_m0_e0	*	98.1003	96.5675	99.6825	69.8517	11619	413	11615	37	15	40.5405
gduggal-snapfb	SNP	ti	map_l150_m2_e0	homalt	97.1871	94.8136	99.6825	79.8291	7221	395	7222	23	14	60.8696
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.7253	99.7681	99.6824	38.1649	3442	8	3453	11	4	36.3636

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