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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 357 358 359 360 361 362 363 364 365 ... 1720 1721 » 18001-18050 / 86044 show all
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.7620	95.9029	99.6947	70.9147	632	27	653	2	2	100.0000
ltrigg-rtg2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	95.8706	92.3291	99.6947	44.2078	662	55	653	2	2	100.0000
mlin-fermikit	SNP	ti	func_cds	*	99.5022	99.3109	99.6942	17.8687	13692	95	13692	42	34	80.9524
egarrison-hhga	SNP	ti	segdup	homalt	99.8003	99.9067	99.6942	88.4424	7498	7	7498	23	23	100.0000
jpowers-varprowl	SNP	*	map_l100_m0_e0	homalt	98.9071	98.1325	99.6940	66.9212	11403	217	11403	35	22	62.8571
gduggal-snapfb	SNP	*	map_l100_m2_e1	homalt	98.4483	97.2334	99.6939	70.5179	27027	769	27029	83	30	36.1446
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0861	98.4860	99.6935	62.3159	1301	20	1301	4	2	50.0000
astatham-gatk	SNP	tv	map_l150_m0_e0	homalt	98.8226	97.9669	99.6935	75.2231	1301	27	1301	4	3	75.0000
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.7675	99.8416	99.6935	39.2563	10715	17	10732	33	4	12.1212
astatham-gatk	INDEL	D1_5	*	*	99.5682	99.4433	99.6934	60.4898	145928	817	145983	449	317	70.6013
astatham-gatk	SNP	ti	map_l125_m1_e0	het	85.4533	74.7728	99.6933	79.6242	13658	4608	13654	42	19	45.2381
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.4450	95.2959	99.6933	71.1249	628	31	650	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.4450	95.2959	99.6933	71.1249	628	31	650	2	2	100.0000
eyeh-varpipe	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7641	99.8350	99.6932	57.1024	10893	18	10724	33	14	42.4242
ckim-isaac	SNP	tv	map_l100_m1_e0	het	78.9057	65.2916	99.6931	67.8118	10066	5351	10069	31	8	25.8065
eyeh-varpipe	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	98.8200	97.9622	99.6930	47.9840	1346	28	19485	60	60	100.0000
astatham-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0091	98.3346	99.6930	62.0890	1299	22	1299	4	3	75.0000
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.3654	95.1442	99.6928	71.1308	627	32	649	2	2	100.0000
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.3654	95.1442	99.6928	71.1308	627	32	649	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	*	hetalt	95.5588	91.7541	99.6928	55.4720	1925	173	1947	6	5	83.3333
ghariani-varprowl	SNP	*	map_l250_m2_e0	homalt	98.1474	96.6493	99.6928	88.8202	2596	90	2596	8	4	50.0000
mlin-fermikit	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	het	98.2146	96.7797	99.6928	37.8817	4538	151	4543	14	2	14.2857
ckim-gatk	INDEL	*	*	hetalt	95.5159	91.6749	99.6928	55.9040	23136	2101	23365	72	70	97.2222
ltrigg-rtg1	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.1048	98.5238	99.6927	45.3838	3604	54	3568	11	2	18.1818
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.3619	99.0333	99.6927	53.9179	3893	38	3893	12	0	0.0000
ckim-vqsr	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5715	99.4508	99.6924	63.7612	11047	61	11021	34	16	47.0588
egarrison-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.6035	99.5149	99.6923	54.6489	6154	30	6156	19	5	26.3158
ltrigg-rtg1	INDEL	D16_PLUS	*	homalt	98.0769	96.5130	99.6923	55.5890	1633	59	1620	5	5	100.0000
astatham-gatk	SNP	*	map_l150_m2_e1	*	91.4615	84.4862	99.6922	80.1245	27213	4997	27207	84	40	47.6190
dgrover-gatk	INDEL	D1_5	*	homalt	99.8204	99.9489	99.6922	62.5668	48901	25	48906	151	149	98.6755
gduggal-bwavard	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	78.1733	64.2951	99.6920	43.7482	3904	2168	3884	12	10	83.3333
ckim-vqsr	INDEL	D1_5	*	het	99.6940	99.6963	99.6917	60.8657	87308	266	87313	270	118	43.7037
hfeng-pmm1	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.2852	94.9924	99.6914	70.8502	626	33	646	2	2	100.0000
hfeng-pmm1	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.2852	94.9924	99.6914	70.8502	626	33	646	2	2	100.0000
ndellapenna-hhga	SNP	tv	map_l100_m1_e0	het	99.0304	98.3784	99.6911	62.9947	15167	250	15167	47	17	36.1702
raldana-dualsentieon	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8453	100.0000	99.6910	63.9569	968	0	968	3	3	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8453	100.0000	99.6910	64.2357	968	0	968	3	2	66.6667
hfeng-pmm2	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8453	100.0000	99.6910	63.6738	968	0	968	3	2	66.6667
bgallagher-sentieon	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8453	100.0000	99.6910	64.2094	968	0	968	3	3	100.0000
ltrigg-rtg1	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.9739	98.2672	99.6909	53.0163	11285	199	11289	35	33	94.2857
gduggal-snapfb	SNP	*	map_l100_m2_e0	homalt	98.4327	97.2060	99.6907	70.5354	26754	769	26756	83	30	36.1446
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	94.6139	90.0293	99.6904	56.8182	307	34	322	1	1	100.0000
ndellapenna-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	59.5731	42.4788	99.6904	42.1147	401	543	322	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	98.5840	97.5019	99.6904	61.7751	1288	33	1288	4	2	50.0000
jmaeng-gatk	SNP	tv	*	*	99.5370	99.3842	99.6902	27.5023	963719	5971	963632	2995	80	2.6711
astatham-gatk	SNP	tv	map_l100_m2_e1	het	86.7191	76.7348	99.6902	76.6919	12230	3708	12226	38	10	26.3158
hfeng-pmm1	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	98.5452	97.4262	99.6902	60.4957	1287	34	1287	4	2	50.0000
astatham-gatk	SNP	tv	map_l125_m1_e0	*	91.3826	84.3531	99.6900	75.2873	13510	2506	13508	42	14	33.3333
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.8850	94.2337	99.6899	70.3721	621	38	643	2	2	100.0000
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.8850	94.2337	99.6899	70.3721	621	38	643	2	2	100.0000

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