PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1751-1800 / 86044 show all
ndellapenna-hhgaINDEL*tech_badpromotershomalt
98.4615
96.9697
100.0000
60.4938
3213200
qzeng-customINDELC6_15map_sirenhet
0.0000
0.0000
100.0000
98.3471
00200
qzeng-customINDELC6_15map_sirenhetalt
0.0000
0.0000
100.0000
80.0000
00100
qzeng-customINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
99.3827
02100
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
99.3711
02100
qzeng-customINDELD16_PLUStech_badpromoters*
85.7143
75.0000
100.0000
40.0000
31300
qzeng-customINDELD16_PLUStech_badpromotershet
85.7143
75.0000
100.0000
0.0000
31300
qzeng-customINDELD1_5HG002compoundhethetalt
91.1048
83.6629
100.0000
61.9355
8547166917700
qzeng-customINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9825
40200
qzeng-customINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9795
20200
qzeng-customINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
21.2766
7407400
qzeng-customINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
79.6963
66.2459
100.0000
93.7500
1207615100
qzeng-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
95.2381
90.9091
100.0000
99.6674
101600
qzeng-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
93.3333
87.5000
100.0000
99.7253
71400
qzeng-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.4100
20200
qzeng-customINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
92.5939
86.2091
100.0000
89.7909
801412828300
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
90.2681
82.2624
100.0000
94.4664
764316481400
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
87.8049
78.2609
100.0000
87.5000
5415100
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
94.7368
90.0000
100.0000
99.7088
91500
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
92.3077
85.7143
100.0000
99.7823
61300
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3939
20200
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.7746
91.8919
100.0000
95.3846
686300
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.7746
91.8919
100.0000
95.0000
343300
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9011
10100
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7805
10100
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
89.5484
81.0747
100.0000
93.6170
65631532300
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
91.3158
84.0193
100.0000
93.1818
57361091300
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
89.5167
81.0229
100.0000
94.3548
66221551700
qzeng-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
90.2681
82.2624
100.0000
94.4664
764316481400
qzeng-customINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
91.5505
84.4177
100.0000
89.0909
581310731200
qzeng-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.3783
94.8905
100.0000
85.0000
390215100
qzeng-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
96.7853
93.7709
100.0000
79.8165
1400932200
qzeng-customINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
98.3498
96.7532
100.0000
68.3333
447151900
qzeng-customINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
57.5758
1301400
qzeng-customINDELD1_5map_l100_m1_e0hetalt
89.4118
80.8511
100.0000
95.5556
389200
qzeng-customINDELD1_5map_l100_m2_e0hetalt
88.3721
79.1667
100.0000
96.0784
3810200
qzeng-customINDELD1_5map_l100_m2_e1hetalt
89.1304
80.3922
100.0000
96.0784
4110200
qzeng-customINDELD1_5map_l125_m1_e0hetalt
81.8182
69.2308
100.0000
96.9697
94100
qzeng-customINDELD1_5map_l125_m2_e0hetalt
84.6154
73.3333
100.0000
97.5610
114100
qzeng-customINDELD1_5map_l125_m2_e1hetalt
84.6154
73.3333
100.0000
97.5610
114100
qzeng-customINDELD1_5map_l250_m0_e0homalt
76.1905
61.5385
100.0000
97.6827
851300
qzeng-customINDELD1_5map_sirenhetalt
90.1961
82.1429
100.0000
94.0476
6915500
qzeng-customINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9948
10100
qzeng-customINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9933
10100
qzeng-customINDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
44.8276
1901600
qzeng-customINDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
qzeng-customINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
42.8571
90800
qzeng-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.4127
10100
qzeng-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
98.3333
00100
qzeng-customINDELD6_15map_l250_m0_e0homalt
66.6667
50.0000
100.0000
97.5309
11200