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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 340 341 342 343 344 345 346 347 348 ... 1720 1721 » 17151-17200 / 86044 show all
jmaeng-gatk	SNP	tv	map_l250_m2_e0	homalt	61.5498	44.5037	99.7608	93.5174	417	520	417	1	1	100.0000
gduggal-snapplat	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	93.2439	87.5263	99.7608	37.2372	1249	178	1251	3	0	0.0000
asubramanian-gatk	SNP	ti	map_l150_m1_e0	het	42.4790	26.9846	99.7608	94.8360	3338	9032	3336	8	4	50.0000
hfeng-pmm2	SNP	*	map_l150_m2_e0	homalt	99.7735	99.7863	99.7607	73.5081	11674	25	11674	28	11	39.2857
hfeng-pmm1	INDEL	I1_5	*	*	99.5147	99.2699	99.7606	57.3300	149564	1100	149609	359	252	70.1950
hfeng-pmm2	INDEL	*	HG002complexvar	hetalt	97.5479	95.4312	99.7606	69.1784	3530	169	3750	9	7	77.7778
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8801	100.0000	99.7606	60.2222	2494	0	2500	6	2	33.3333
ltrigg-rtg1	SNP	tv	map_l125_m2_e0	*	99.1334	98.5142	99.7605	64.2909	16244	245	16244	39	9	23.0769
hfeng-pmm1	SNP	*	map_l150_m1_e0	homalt	99.7516	99.7427	99.7604	71.3075	11244	29	11244	27	10	37.0370
hfeng-pmm3	SNP	*	map_l150_m1_e0	homalt	99.7427	99.7250	99.7604	71.2100	11242	31	11242	27	10	37.0370
hfeng-pmm3	INDEL	*	HG002complexvar	hetalt	97.4347	95.2149	99.7604	68.3328	3522	177	3748	9	7	77.7778
jli-custom	INDEL	I1_5	*	homalt	99.8065	99.8527	99.7603	53.8126	60339	89	60343	145	140	96.5517
ltrigg-rtg2	SNP	ti	map_l100_m2_e1	het	98.9153	98.0846	99.7602	53.1134	30367	593	30370	73	6	8.2192
gduggal-snapfb	SNP	ti	*	homalt	99.7832	99.8062	99.7602	19.1162	801483	1556	801532	1927	269	13.9595
ckim-isaac	INDEL	D1_5	map_l100_m2_e1	homalt	80.2314	67.0968	99.7602	75.3982	416	204	416	1	1	100.0000
bgallagher-sentieon	SNP	*	HG002compoundhet	het	99.7460	99.7320	99.7601	45.7386	14140	38	14138	34	11	32.3529
egarrison-hhga	SNP	tv	map_l150_m2_e0	*	99.2922	98.8287	99.7600	74.2574	11222	133	11222	27	12	44.4444
gduggal-bwafb	SNP	tv	HG002complexvar	het	99.7366	99.7134	99.7598	23.4830	150302	432	150365	362	122	33.7017
astatham-gatk	SNP	*	map_l100_m2_e0	het	86.8923	76.9650	99.7597	75.4072	35711	10688	35700	86	33	38.3721
ltrigg-rtg1	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.2985	98.8415	99.7597	44.6403	6655	78	6641	16	6	37.5000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4577	99.1576	99.7596	63.2532	17420	148	17430	42	21	50.0000
hfeng-pmm1	SNP	tv	map_l100_m2_e0	*	99.6119	99.4647	99.7596	65.8235	24899	134	24895	60	17	28.3333
bgallagher-sentieon	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.5204	99.2823	99.7596	46.4607	415	3	415	1	1	100.0000
ckim-dragen	SNP	*	map_l150_m2_e0	homalt	99.4944	99.2307	99.7595	68.4345	11609	90	11614	28	25	89.2857
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	het	99.7595	99.7595	99.7595	70.6652	6221	15	6221	15	12	80.0000
egarrison-hhga	SNP	tv	map_l150_m1_e0	*	99.2818	98.8087	99.7594	72.5943	10782	130	10782	26	12	46.1538
ckim-vqsr	SNP	*	*	hetalt	97.4148	95.1780	99.7593	54.6645	829	42	829	2	2	100.0000
ckim-vqsr	SNP	tv	*	hetalt	97.4148	95.1780	99.7593	54.6645	829	42	829	2	2	100.0000
ltrigg-rtg1	SNP	ti	map_l100_m1_e0	het	99.0192	98.2900	99.7593	54.6205	29430	512	29432	71	7	9.8592
astatham-gatk	SNP	*	map_l125_m2_e0	*	91.3143	84.1877	99.7590	76.2743	39335	7388	39329	95	43	45.2632
astatham-gatk	SNP	tv	HG002compoundhet	het	98.5818	97.4321	99.7590	55.5988	4553	120	4553	11	11	100.0000
hfeng-pmm2	SNP	*	map_l100_m0_e0	homalt	99.7504	99.7418	99.7590	63.9103	11590	30	11590	28	11	39.2857
ckim-isaac	SNP	tv	map_l100_m2_e0	*	75.7866	61.1033	99.7587	67.3111	15296	9737	15299	37	12	32.4324
egarrison-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5782	99.3986	99.7586	57.7309	2479	15	2479	6	2	33.3333
jli-custom	SNP	*	func_cds	het	99.8568	99.9552	99.7586	24.6835	11156	5	11156	27	0	0.0000
ckim-gatk	SNP	ti	*	het	99.7182	99.6780	99.7585	24.7182	1277763	4128	1277713	3093	133	4.3000
ltrigg-rtg1	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.6975	99.6368	99.7584	27.0564	2469	9	2477	6	0	0.0000
hfeng-pmm1	SNP	tv	map_l100_m1_e0	*	99.6055	99.4531	99.7584	64.1006	24367	134	24363	59	17	28.8136
ltrigg-rtg1	SNP	tv	map_l150_m2_e0	*	98.9030	98.0625	99.7581	68.2059	11135	220	11134	27	6	22.2222
hfeng-pmm1	SNP	tv	map_l100_m2_e1	*	99.6118	99.4660	99.7580	65.8552	25148	135	25144	61	17	27.8689
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.4571	99.1580	99.7580	57.7755	2473	21	2473	6	0	0.0000
rpoplin-dv42	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.1576	98.5646	99.7579	44.6381	412	6	412	1	0	0.0000
jmaeng-gatk	SNP	*	HG002compoundhet	het	99.2949	98.8362	99.7579	46.8998	14013	165	14011	34	28	82.3529
ltrigg-rtg1	SNP	ti	map_siren	*	99.5060	99.2556	99.7576	49.1435	99607	747	99601	242	38	15.7025
ltrigg-rtg1	SNP	tv	map_l150_m1_e0	*	98.8720	98.0022	99.7574	65.7671	10694	218	10693	26	6	23.0769
rpoplin-dv42	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	86.7813	76.7925	99.7573	48.6284	407	123	411	1	1	100.0000
ckim-vqsr	SNP	*	HG002compoundhet	het	99.1735	98.5964	99.7573	46.7768	13979	199	13977	34	25	73.5294
ltrigg-rtg2	SNP	*	HG002compoundhet	*	99.3639	98.9737	99.7572	37.9767	25557	265	25473	62	19	30.6452
hfeng-pmm2	INDEL	*	HG002complexvar	*	99.1003	98.4520	99.7572	57.3339	75747	1191	75614	184	143	77.7174
asubramanian-gatk	SNP	ti	map_l150_m2_e1	*	40.9816	25.7878	99.7572	94.2645	5344	15379	5342	13	5	38.4615

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