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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 331 332 333 334 335 336 337 338 339 ... 1720 1721 » 16701-16750 / 86044 show all
gduggal-snapvard	SNP	*	map_l100_m2_e1	homalt	98.0418	96.3556	99.7880	62.8493	26783	1013	26357	56	43	76.7857
hfeng-pmm1	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	97.2610	94.8589	99.7879	66.5958	941	51	941	2	0	0.0000
bgallagher-sentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.3133	98.8433	99.7877	85.5411	940	11	940	2	2	100.0000
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.3133	98.8433	99.7877	85.1420	940	11	940	2	2	100.0000
ndellapenna-hhga	SNP	*	map_l125_m2_e0	*	99.1850	98.5896	99.7877	69.4898	46064	659	46064	98	49	50.0000
ndellapenna-hhga	SNP	*	map_l125_m2_e1	*	99.1837	98.5869	99.7877	69.5422	46535	667	46535	99	49	49.4949
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.8217	99.8558	99.7875	65.2986	1385	2	1409	3	2	66.6667
astatham-gatk	SNP	ti	map_l100_m1_e0	het	86.8541	76.8887	99.7875	73.5726	23022	6920	23015	49	23	46.9388
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.2954	98.8082	99.7875	49.1626	912	11	939	2	2	100.0000
asubramanian-gatk	SNP	ti	map_l100_m2_e1	het	65.2727	48.4981	99.7873	85.9875	15015	15945	15011	32	12	37.5000
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.6807	99.5745	99.7872	69.0789	468	2	469	1	1	100.0000
egarrison-hhga	SNP	tv	map_l250_m2_e1	homalt	99.4698	99.1543	99.7872	87.6462	938	8	938	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.6807	99.5745	99.7872	69.5003	468	2	469	1	1	100.0000
rpoplin-dv42	SNP	ti	segdup	homalt	99.8469	99.9067	99.7871	88.5156	7498	7	7498	16	16	100.0000
egarrison-hhga	SNP	*	map_l100_m2_e1	het	99.3694	98.9552	99.7871	65.4429	46408	490	46409	99	31	31.3131
ckim-isaac	SNP	tv	HG002complexvar	*	95.4727	91.5159	99.7871	19.3101	225271	20884	225437	481	401	83.3680
ltrigg-rtg2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.9813	98.1884	99.7871	45.7254	6558	121	6563	14	11	78.5714
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6346	99.4826	99.7870	59.5165	16344	85	17330	37	22	59.4595
egarrison-hhga	SNP	*	map_l100_m2_e0	het	99.3648	98.9461	99.7870	65.4283	45910	489	45911	98	31	31.6327
astatham-gatk	SNP	tv	segdup	het	98.6416	97.5222	99.7869	92.4167	5156	131	5152	11	0	0.0000
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.5738	99.3617	99.7868	68.6707	467	3	468	1	1	100.0000
bgallagher-sentieon	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.5738	99.3617	99.7868	68.2894	467	3	468	1	1	100.0000
ndellapenna-hhga	SNP	tv	map_l250_m2_e1	homalt	99.3631	98.9429	99.7868	87.0245	936	10	936	2	2	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.4666	99.1489	99.7863	69.8065	466	4	467	1	1	100.0000
hfeng-pmm1	SNP	ti	map_l100_m1_e0	*	99.5693	99.3532	99.7862	62.2569	47621	310	47614	102	32	31.3725
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0538	98.3322	99.7862	63.3791	17275	293	17266	37	4	10.8108
eyeh-varpipe	SNP	tv	map_l250_m2_e1	homalt	99.6815	99.5772	99.7861	89.7714	942	4	933	2	2	100.0000
egarrison-hhga	SNP	tv	map_l125_m1_e0	*	99.3983	99.0135	99.7861	68.1855	15858	158	15858	34	17	50.0000
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.5363	99.2878	99.7860	56.6980	16312	117	16318	35	21	60.0000
ltrigg-rtg1	SNP	*	map_l150_m2_e0	*	98.9313	98.0912	99.7860	68.8564	31244	608	31247	67	22	32.8358
gduggal-snapvard	SNP	*	map_l100_m2_e0	homalt	98.0484	96.3703	99.7860	62.8472	26524	999	26107	56	43	76.7857
hfeng-pmm1	SNP	tv	map_l125_m2_e1	homalt	99.7942	99.8024	99.7860	69.8227	6062	12	6062	13	5	38.4615
hfeng-pmm3	SNP	tv	map_l125_m2_e1	homalt	99.7612	99.7366	99.7859	69.7479	6058	16	6058	13	5	38.4615
jmaeng-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.5726	99.3603	99.7859	85.7055	466	3	466	1	1	100.0000
ckim-vqsr	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.3592	98.9362	99.7859	69.6359	465	5	466	1	1	100.0000
gduggal-snapplat	SNP	ti	map_l250_m2_e0	homalt	88.7618	79.9314	99.7857	88.9135	1398	351	1397	3	3	100.0000
ndellapenna-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.4473	99.1113	99.7856	56.2027	16283	146	16290	35	23	65.7143
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.2269	98.6744	99.7855	71.4089	1861	25	1861	4	2	50.0000
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4652	99.1471	99.7854	85.1071	465	4	465	1	1	100.0000
jli-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4652	99.1471	99.7854	85.6439	465	4	465	1	0	0.0000
jli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.3590	98.9362	99.7854	67.0205	465	5	465	1	1	100.0000
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4652	99.1471	99.7854	85.4602	465	4	465	1	1	100.0000
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4652	99.1471	99.7854	85.4602	465	4	465	1	1	100.0000
bgallagher-sentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4652	99.1471	99.7854	85.5145	465	4	465	1	1	100.0000
asubramanian-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.0342	98.2942	99.7854	85.3275	461	8	465	1	1	100.0000
ltrigg-rtg1	SNP	*	map_l150_m2_e1	*	98.9386	98.1062	99.7853	68.9443	31600	610	31606	68	22	32.3529
astatham-gatk	SNP	ti	map_l125_m1_e0	*	91.1797	83.9407	99.7852	74.5658	24624	4711	24620	53	29	54.7170
hfeng-pmm3	SNP	*	map_siren	het	99.6837	99.5824	99.7852	54.5786	90611	380	90597	195	18	9.2308
hfeng-pmm3	SNP	tv	HG002compoundhet	het	94.3711	89.5142	99.7852	53.0848	4183	490	4181	9	2	22.2222
egarrison-hhga	SNP	tv	map_l250_m2_e0	homalt	99.4647	99.1462	99.7852	87.5551	929	8	929	2	2	100.0000

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