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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 317 318 319 320 321 322 323 324 325 ... 1720 1721 » 16001-16050 / 86044 show all
eyeh-varpipe	SNP	*	map_l125_m0_e0	homalt	99.7810	99.7318	99.8302	73.0404	6694	18	6469	11	5	45.4545
hfeng-pmm3	INDEL	D1_5	map_l100_m1_e0	homalt	99.5766	99.3243	99.8302	79.6546	588	4	588	1	1	100.0000
egarrison-hhga	SNP	ti	map_l125_m2_e0	*	99.4693	99.1110	99.8302	70.7438	29989	269	29989	51	24	47.0588
hfeng-pmm1	INDEL	D1_5	map_l100_m1_e0	homalt	99.5766	99.3243	99.8302	80.5031	588	4	588	1	1	100.0000
ltrigg-rtg2	SNP	ti	map_l250_m2_e1	homalt	99.6608	99.4921	99.8301	85.6923	1763	9	1763	3	3	100.0000
bgallagher-sentieon	SNP	tv	map_l150_m2_e1	homalt	99.6486	99.4678	99.8301	71.0988	4112	22	4112	7	5	71.4286
qzeng-custom	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6848	99.5401	99.8300	56.5387	17098	79	17030	29	9	31.0345
jpowers-varprowl	SNP	ti	map_l100_m0_e0	homalt	99.0013	98.1863	99.8300	65.3054	7633	141	7633	13	10	76.9231
hfeng-pmm3	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.5425	99.2565	99.8300	53.1529	2937	22	2937	5	0	0.0000
hfeng-pmm2	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3527	98.8800	99.8300	48.5551	11742	133	11747	20	11	55.0000
jlack-gatk	SNP	ti	map_l100_m0_e0	homalt	98.9685	98.1219	99.8299	59.9927	7628	146	7628	13	11	84.6154
gduggal-bwafb	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.5418	99.2552	99.8299	54.5384	14660	110	14675	25	12	48.0000
dgrover-gatk	SNP	*	func_cds	het	99.8970	99.9642	99.8299	26.9739	11157	4	11154	19	0	0.0000
raldana-dualsentieon	INDEL	D1_5	HG002complexvar	*	99.1616	98.5022	99.8299	57.5831	32225	490	32276	55	41	74.5455
asubramanian-gatk	SNP	ti	map_siren	het	80.0204	66.7709	99.8298	71.1364	41653	20729	41647	71	23	32.3944
egarrison-hhga	SNP	ti	map_l250_m2_e1	homalt	99.5188	99.2099	99.8296	87.5758	1758	14	1758	3	3	100.0000
qzeng-custom	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	89.3374	80.8410	99.8295	33.0289	3076	729	1757	3	2	66.6667
ckim-gatk	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8174	99.8052	99.8295	60.0496	16397	32	16396	28	4	14.2857
ckim-dragen	SNP	tv	HG002compoundhet	het	99.7327	99.6362	99.8294	55.7255	4656	17	4682	8	3	37.5000
jmaeng-gatk	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7777	99.7261	99.8294	60.1055	16384	45	16383	28	4	14.2857
gduggal-bwafb	SNP	tv	map_l150_m2_e1	homalt	99.4171	99.0082	99.8293	75.3205	4093	41	4093	7	5	71.4286
hfeng-pmm1	SNP	ti	map_siren	het	99.5806	99.3331	99.8292	52.2251	61966	416	61957	106	24	22.6415
ndellapenna-hhga	SNP	ti	map_l250_m2_e1	homalt	99.3193	98.8149	99.8290	86.9124	1751	21	1751	3	3	100.0000
astatham-gatk	SNP	tv	map_l150_m2_e1	homalt	99.3315	98.8389	99.8290	71.2267	4086	48	4086	7	5	71.4286
gduggal-bwafb	SNP	tv	HG002complexvar	*	99.7871	99.7453	99.8289	23.3366	245528	627	245605	421	174	41.3302
eyeh-varpipe	SNP	tv	map_l150_m2_e1	homalt	99.7814	99.7339	99.8289	76.4129	4123	11	4083	7	3	42.8571
hfeng-pmm1	SNP	*	map_l125_m2_e1	homalt	99.8117	99.7947	99.8288	69.0610	17496	36	17496	30	12	40.0000
jlack-gatk	INDEL	D1_5	map_l100_m1_e0	homalt	99.1497	98.4797	99.8288	81.5598	583	9	583	1	1	100.0000
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8692	99.9098	99.8288	57.6963	11074	10	11076	19	3	15.7895
egarrison-hhga	SNP	ti	map_l125_m2_e1	*	99.4698	99.1135	99.8287	70.7805	30298	271	30298	52	24	46.1538
hfeng-pmm1	INDEL	D1_5	map_siren	homalt	99.7001	99.5719	99.8286	78.3166	1163	5	1165	2	2	100.0000
asubramanian-gatk	SNP	tv	map_l125_m1_e0	*	45.0440	29.0834	99.8285	92.0394	4658	11358	4657	8	1	12.5000
ltrigg-rtg2	INDEL	D1_5	map_l100_m1_e0	homalt	98.8920	97.9730	99.8285	75.6067	580	12	582	1	1	100.0000
ltrigg-rtg2	SNP	ti	map_l100_m2_e0	*	99.2429	98.6642	99.8285	55.8705	48307	654	48309	83	19	22.8916
jpowers-varprowl	SNP	*	func_cds	homalt	99.8926	99.9570	99.8283	23.7867	6976	3	6976	12	12	100.0000
jpowers-varprowl	SNP	ti	map_l150_m2_e1	homalt	99.0436	98.2712	99.8283	75.6142	7560	133	7560	13	10	76.9231
ghariani-varprowl	SNP	ti	map_l150_m2_e1	homalt	99.0304	98.2452	99.8283	73.7883	7558	135	7558	13	10	76.9231
dgrover-gatk	SNP	ti	map_l250_m2_e1	homalt	99.1191	98.4199	99.8283	86.6233	1744	28	1744	3	2	66.6667
ltrigg-rtg2	SNP	tv	map_l125_m0_e0	*	98.1288	96.4862	99.8283	59.5773	6398	233	6396	11	0	0.0000
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5710	99.3151	99.8282	17.5637	580	4	581	1	1	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.7914	99.7547	99.8281	43.5620	4067	10	4065	7	3	42.8571
jli-custom	SNP	*	map_l150_m0_e0	homalt	99.5955	99.3641	99.8280	71.6988	4063	26	4063	7	7	100.0000
hfeng-pmm2	SNP	ti	map_l125_m1_e0	homalt	99.8234	99.8189	99.8280	66.1185	11025	20	11025	19	9	47.3684
bgallagher-sentieon	SNP	*	*	het	99.8943	99.9607	99.8280	19.9469	1872851	736	1872726	3227	129	3.9975
bgallagher-sentieon	SNP	tv	map_l150_m2_e0	homalt	99.6442	99.4612	99.8279	71.1244	4061	22	4061	7	5	71.4286
raldana-dualsentieon	SNP	ti	*	hetalt	99.7420	99.6564	99.8279	37.7278	580	2	580	1	1	100.0000
hfeng-pmm2	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6849	99.5423	99.8279	67.4388	1740	8	1740	3	1	33.3333
hfeng-pmm3	SNP	ti	*	hetalt	99.7420	99.6564	99.8279	45.8022	580	2	580	1	1	100.0000
jli-custom	SNP	ti	*	hetalt	99.7420	99.6564	99.8279	42.8150	580	2	580	1	1	100.0000
ltrigg-rtg2	SNP	ti	map_l250_m2_e0	homalt	99.6564	99.4854	99.8279	85.6390	1740	9	1740	3	3	100.0000

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