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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 300 301 302 303 304 305 306 307 308 ... 1720 1721 » 15151-15200 / 86044 show all
eyeh-varpipe	SNP	*	map_l100_m2_e1	homalt	99.8719	99.8597	99.8841	65.3160	27757	39	26718	31	16	51.6129
jli-custom	SNP	ti	func_cds	*	99.9166	99.9492	99.8840	21.7559	13780	7	13780	16	0	0.0000
eyeh-varpipe	SNP	ti	map_l250_m2_e0	homalt	99.8276	99.7713	99.8839	88.9360	1745	4	1721	2	2	100.0000
gduggal-bwafb	SNP	*	HG002compoundhet	hetalt	99.8259	99.7680	99.8839	24.0741	860	2	860	1	1	100.0000
gduggal-bwafb	SNP	tv	HG002compoundhet	hetalt	99.8259	99.7680	99.8839	24.0741	860	2	860	1	1	100.0000
astatham-gatk	SNP	*	map_l125_m2_e0	homalt	99.4712	99.0619	99.8839	66.1554	17212	163	17212	20	16	80.0000
hfeng-pmm3	INDEL	I1_5	HG002complexvar	hetalt	98.0250	96.2341	99.8839	70.2777	1661	65	1721	2	2	100.0000
hfeng-pmm2	INDEL	I1_5	HG002complexvar	hetalt	98.0250	96.2341	99.8839	71.1509	1661	65	1720	2	2	100.0000
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7101	99.5369	99.8839	62.7379	3439	16	3442	4	4	100.0000
rpoplin-dv42	SNP	ti	map_siren	homalt	99.8060	99.7283	99.8838	52.4445	37813	103	37814	44	42	95.4545
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.1375	92.6622	99.8837	34.9962	1528	121	1718	2	2	100.0000
gduggal-bwafb	SNP	ti	map_l250_m2_e0	homalt	99.0487	98.2276	99.8837	88.8268	1718	31	1718	2	2	100.0000
gduggal-bwavard	SNP	*	map_l100_m2_e1	homalt	98.6017	97.3521	99.8837	62.7989	27060	736	26631	31	25	80.6452
bgallagher-sentieon	SNP	ti	map_l100_m0_e0	homalt	99.6648	99.4469	99.8837	59.2653	7731	43	7731	9	7	77.7778
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6516	99.4206	99.8837	61.5213	858	5	859	1	1	100.0000
rpoplin-dv42	SNP	*	func_cds	het	99.9149	99.9462	99.8836	25.6262	11155	6	11152	13	3	23.0769
jli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.4777	99.0751	99.8835	34.2649	1714	16	1715	2	2	100.0000
jlack-gatk	SNP	*	HG002compoundhet	hetalt	99.6512	99.4200	99.8834	22.4231	857	5	857	1	1	100.0000
jlack-gatk	SNP	tv	HG002compoundhet	hetalt	99.6512	99.4200	99.8834	22.4231	857	5	857	1	1	100.0000
eyeh-varpipe	SNP	ti	map_l100_m2_e1	homalt	99.8795	99.8756	99.8834	64.4482	18471	23	17986	21	12	57.1429
egarrison-hhga	SNP	*	HG002compoundhet	hetalt	99.5928	99.3039	99.8833	23.6185	856	6	856	1	1	100.0000
egarrison-hhga	SNP	tv	HG002compoundhet	hetalt	99.5928	99.3039	99.8833	23.6185	856	6	856	1	1	100.0000
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7610	99.6391	99.8833	55.2713	17115	62	17116	20	15	75.0000
ndellapenna-hhga	SNP	tv	map_l125_m2_e0	homalt	99.7253	99.5679	99.8833	68.5442	5991	26	5991	7	6	85.7143
gduggal-bwaplat	SNP	ti	map_l125_m0_e0	homalt	55.1813	38.1207	99.8832	84.5557	1712	2779	1710	2	2	100.0000
hfeng-pmm2	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.3024	98.7283	99.8831	33.4500	1708	22	1709	2	1	50.0000
astatham-gatk	SNP	ti	map_l100_m0_e0	homalt	99.3534	98.8294	99.8830	59.4667	7683	91	7683	9	8	88.8889
hfeng-pmm3	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.5327	99.1851	99.8828	53.0235	4260	35	4260	5	0	0.0000
gduggal-bwafb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.6495	99.4172	99.8828	51.6714	853	5	852	1	0	0.0000
gduggal-bwavard	SNP	*	map_l100_m2_e0	homalt	98.6138	97.3767	99.8826	62.7969	26801	722	26381	31	25	80.6452
ltrigg-rtg1	SNP	tv	map_l250_m1_e0	homalt	99.6487	99.4159	99.8826	86.0259	851	5	851	1	1	100.0000
bgallagher-sentieon	SNP	ti	map_l150_m2_e1	homalt	99.6940	99.5060	99.8826	70.5038	7655	38	7655	9	7	77.7778
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.2777	94.8052	99.8826	40.8681	1679	92	1701	2	2	100.0000
egarrison-hhga	SNP	ti	func_cds	het	99.9236	99.9647	99.8825	23.1721	8501	3	8501	10	0	0.0000
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.5931	99.3054	99.8825	45.7630	3431	24	3401	4	4	100.0000
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6790	99.4763	99.8825	56.1108	28112	148	28064	33	18	54.5455
ltrigg-rtg2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6510	99.4206	99.8824	57.6060	858	5	849	1	1	100.0000
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.6223	93.5683	99.8824	33.7490	1513	104	1698	2	2	100.0000
jlack-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	94.8351	90.2733	99.8824	28.4609	4195	452	4248	5	4	80.0000
hfeng-pmm2	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	het	97.5045	95.2373	99.8823	66.3421	5939	297	5939	7	4	57.1429
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.5563	93.4447	99.8823	33.2941	1511	106	1697	2	2	100.0000
jli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8234	99.7647	99.8822	49.2225	848	2	848	1	1	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.1287	94.5229	99.8822	39.6374	1674	97	1696	2	2	100.0000
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5343	99.1889	99.8821	57.8109	856	7	847	1	1	100.0000
jmaeng-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.6471	99.4131	99.8821	84.7756	847	5	847	1	1	100.0000
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.6222	93.5683	99.8821	33.8144	1513	104	1695	2	2	100.0000
hfeng-pmm3	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7054	99.5294	99.8819	48.3851	846	4	846	1	1	100.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.7054	99.5294	99.8819	48.1640	846	4	846	1	1	100.0000
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.5289	99.1784	99.8818	84.5845	845	7	845	1	1	100.0000
gduggal-bwavard	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.6054	97.3613	99.8818	50.3445	19666	533	19436	23	17	73.9130

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