PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
11551-11600 / 86044 show all | |||||||||||||||
| cchapple-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | het | 100.0000 | 100.0000 | 100.0000 | 79.0850 | 16 | 0 | 32 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 100.0000 | 100.0000 | 100.0000 | 80.4878 | 8 | 0 | 8 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | het | 66.6667 | 50.0000 | 100.0000 | 66.6667 | 1 | 1 | 4 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.2759 | 2 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0769 | 2 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.8417 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0392 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0519 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.9247 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.6000 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.7778 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.7941 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m1_e0 | * | 100.0000 | 100.0000 | 100.0000 | 99.5413 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m1_e0 | het | 100.0000 | 100.0000 | 100.0000 | 99.1667 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m2_e0 | * | 100.0000 | 100.0000 | 100.0000 | 99.5868 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m2_e0 | het | 100.0000 | 100.0000 | 100.0000 | 99.2857 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m2_e1 | * | 100.0000 | 100.0000 | 100.0000 | 99.5951 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m2_e1 | het | 100.0000 | 100.0000 | 100.0000 | 99.3007 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | segdup | homalt | 100.0000 | 100.0000 | 100.0000 | 93.2384 | 19 | 0 | 19 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 71.4286 | 4 | 0 | 4 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 71.4286 | 2 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 71.4286 | 2 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | I1_5 | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 24.3590 | 119 | 0 | 118 | 0 | 0 | ||
| cchapple-custom | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 99.8553 | 99.7110 | 100.0000 | 75.3957 | 345 | 1 | 342 | 0 | 0 | ||
| cchapple-custom | INDEL | I1_5 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.8421 | 9 | 0 | 9 | 0 | 0 | ||
| cchapple-custom | INDEL | I1_5 | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 54.3478 | 22 | 0 | 21 | 0 | 0 | ||
| cchapple-custom | INDEL | I1_5 | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 47.0588 | 8 | 0 | 9 | 0 | 0 | ||
| cchapple-custom | INDEL | I1_5 | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 58.6207 | 13 | 0 | 12 | 0 | 0 | ||
| cchapple-custom | INDEL | I6_15 | func_cds | het | 100.0000 | 100.0000 | 100.0000 | 36.3636 | 24 | 0 | 28 | 0 | 0 | ||
| cchapple-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | het | 97.9827 | 96.0452 | 100.0000 | 69.1415 | 170 | 7 | 266 | 0 | 0 | ||
| cchapple-custom | INDEL | I6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | het | 98.3333 | 96.7213 | 100.0000 | 68.6833 | 118 | 4 | 176 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 40.0000 | 25.0000 | 100.0000 | 98.3051 | 1 | 3 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | het | 100.0000 | 100.0000 | 100.0000 | 97.0588 | 1 | 0 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l125_m0_e0 | het | 61.5385 | 44.4444 | 100.0000 | 95.5056 | 4 | 5 | 4 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l125_m1_e0 | het | 66.6667 | 50.0000 | 100.0000 | 92.8571 | 10 | 10 | 10 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l125_m2_e0 | het | 66.6667 | 50.0000 | 100.0000 | 93.4211 | 10 | 10 | 10 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l125_m2_e1 | het | 66.6667 | 50.0000 | 100.0000 | 93.5065 | 10 | 10 | 10 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m0_e0 | * | 72.7273 | 57.1429 | 100.0000 | 96.7480 | 4 | 3 | 4 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m0_e0 | het | 72.7273 | 57.1429 | 100.0000 | 94.2029 | 4 | 3 | 4 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m1_e0 | het | 66.6667 | 50.0000 | 100.0000 | 93.6937 | 7 | 7 | 7 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m2_e0 | het | 66.6667 | 50.0000 | 100.0000 | 93.4426 | 8 | 8 | 8 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l150_m2_e1 | het | 66.6667 | 50.0000 | 100.0000 | 93.5484 | 8 | 8 | 8 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l250_m1_e0 | het | 50.0000 | 33.3333 | 100.0000 | 98.4848 | 1 | 2 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l250_m2_e0 | het | 50.0000 | 33.3333 | 100.0000 | 98.6842 | 1 | 2 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | map_l250_m2_e1 | het | 50.0000 | 33.3333 | 100.0000 | 98.7342 | 1 | 2 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | tech_badpromoters | het | 66.6667 | 50.0000 | 100.0000 | 0.0000 | 2 | 2 | 2 | 0 | 0 | ||
| ciseli-custom | INDEL | D1_5 | decoy | * | 85.7143 | 75.0000 | 100.0000 | 99.9584 | 3 | 1 | 3 | 0 | 0 | ||
| ciseli-custom | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9620 | 2 | 0 | 2 | 0 | 0 | ||
| ciseli-custom | INDEL | D1_5 | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9488 | 1 | 0 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | D1_5 | segdupwithalt | * | 100.0000 | 100.0000 | 100.0000 | 99.9948 | 1 | 0 | 1 | 0 | 0 | ||