PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
10451-10500 / 86044 show all
jli-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.0149
20200
jli-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
95.2381
10100
jli-customINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
96.7742
93.7500
100.0000
99.8986
1511500
jli-customINDEL*lowcmp_SimpleRepeat_homopolymer_gt10homalt
97.5610
95.2381
100.0000
99.9606
2012100
jli-customINDEL*lowcmp_SimpleRepeat_triTR_51to200hetalt
96.6942
93.6000
100.0000
26.0870
117811900
jli-customINDEL*map_l125_m0_e0hetalt
95.2381
90.9091
100.0000
95.7082
1011000
jli-customINDEL*map_l125_m1_e0hetalt
94.7368
90.0000
100.0000
92.6078
3643600
jli-customINDEL*map_l125_m2_e0hetalt
95.0000
90.4762
100.0000
93.1777
3843800
jli-customINDEL*map_l125_m2_e1hetalt
93.8272
88.3721
100.0000
93.2981
3853800
jli-customINDEL*map_l150_m0_e0hetalt
94.1176
88.8889
100.0000
95.5556
81800
jli-customINDEL*map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
95.2255
1831800
jli-customINDEL*map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
95.8333
1831800
jli-customINDEL*map_l150_m2_e1hetalt
90.4762
82.6087
100.0000
95.6916
1941900
jli-customINDEL*map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
97.9487
42400
jli-customINDEL*map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
98.3051
42400
jli-customINDEL*map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
98.3471
42400
jli-customINDEL*segduphetalt
96.8254
93.8462
100.0000
94.4815
122812400
jli-customINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9971
10100
jli-customINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9953
10100
jli-customINDEL*tech_badpromoters*
97.9866
96.0526
100.0000
53.7975
7337300
jli-customINDEL*tech_badpromotershet
96.0000
92.3077
100.0000
51.3514
3633600
jli-customINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
jli-customINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
56.5789
3303300
hfeng-pmm2INDELD16_PLUSHG002compoundhethetalt
96.7604
93.7241
100.0000
26.3804
1807121192000
hfeng-pmm2INDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.1549
60600
hfeng-pmm2INDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.2278
40400
hfeng-pmm2INDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.7261
20200
hfeng-pmm2INDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
69.2308
40400
hfeng-pmm2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
hfeng-pmm2INDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
98.0701
96.2133
100.0000
37.0181
124549135600
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
84.8837
1011300
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
73.2558
1902300
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
48.1481
1201400
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
46.4467
211021100
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
98.1661
96.3983
100.0000
32.2115
9103498700
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
98.4456
96.9388
100.0000
33.7549
7602483800
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
91.6049
84.5103
100.0000
35.3276
3716845400
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
55.8824
1201500
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
83.0882
2302300
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
92.9688
90900
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
96.9940
1501500
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
98.4520
96.9512
100.0000
38.2784
3181033700
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
98.0000
96.0784
100.0000
22.7273
4925100
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
61.8644
4504500
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
93.6170
88.0000
100.0000
43.9024
2232300
hfeng-pmm2INDELD16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.3846
40500
hfeng-pmm2INDELD16_PLUSmap_l100_m1_e0hetalt
91.6667
84.6154
100.0000
78.5047
2242300
hfeng-pmm2INDELD16_PLUSmap_l100_m2_e0hetalt
91.6667
84.6154
100.0000
79.3103
2242400
hfeng-pmm2INDELD16_PLUSmap_l100_m2_e1hetalt
90.9091
83.3333
100.0000
78.5714
2552700