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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9801-9850 / 86044 show all
hfeng-pmm1INDELI6_15map_l125_m2_e1hetalt
93.3333
87.5000
100.0000
90.6667
71700
hfeng-pmm1INDELI6_15map_l125_m2_e1homalt
96.5517
93.3333
100.0000
92.1348
1411400
hfeng-pmm1INDELI6_15map_l150_m0_e0homalt
85.7143
75.0000
100.0000
94.4444
31300
hfeng-pmm1INDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.8571
30300
hfeng-pmm1INDELI6_15map_l150_m1_e0homalt
92.3077
85.7143
100.0000
94.5455
61600
hfeng-pmm1INDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
94.0000
30300
hfeng-pmm1INDELI6_15map_l150_m2_e0homalt
92.3077
85.7143
100.0000
95.3846
61600
hfeng-pmm1INDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
94.2308
30300
hfeng-pmm1INDELI6_15map_l150_m2_e1homalt
93.3333
87.5000
100.0000
94.8905
71700
hfeng-pmm1INDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.0588
21200
hfeng-pmm1INDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.2603
21200
hfeng-pmm1INDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
97.4026
21200
hfeng-pmm1INDELI6_15map_sirenhetalt
96.4029
93.0556
100.0000
79.3846
6756700
hfeng-pmm1INDELI6_15segduphetalt
98.8764
97.7778
100.0000
89.8148
4414400
hfeng-pmm1INDELI6_15segduphomalt
100.0000
100.0000
100.0000
91.8966
4704700
hfeng-pmm1INDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
53.5714
1301300
hfeng-pmm1INDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
53.3333
70700
hfeng-pmm1INDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
hfeng-pmm1INDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
30300
hfeng-pmm1SNP*HG002complexvarhetalt
99.6764
99.3548
100.0000
39.1304
308230800
hfeng-pmm1SNP*HG002compoundhethetalt
99.8839
99.7680
100.0000
23.0769
860286000
hfeng-pmm1SNP*func_cdshetalt
100.0000
100.0000
100.0000
62.9630
1001000
hfeng-pmm1SNP*func_cdshomalt
99.9928
99.9857
100.0000
22.0596
69781697800
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
94.0945
1501500
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.8444
99.6892
100.0000
52.3753
16045160400
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
10100
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9778
99.9556
100.0000
53.1919
22511225100
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.7155
99.4327
100.0000
57.3263
385622385600
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.5570
99.1179
100.0000
57.0236
247222247200
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
57.8096
13830138300
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
97.6744
95.4545
100.0000
91.5527
105510500
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.3118
98.6330
100.0000
85.2817
9381393800
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.5283
99.0610
100.0000
84.2066
844884400
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3415
30300
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.7696
99.5402
100.0000
80.2993
389718389700
hfeng-pmm1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
94.0945
1501500
hfeng-pmm1SNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
96.1538
10100
hfeng-pmm1SNP*lowcmp_SimpleRepeat_diTR_51to200homalt
92.8571
86.6667
100.0000
96.2428
1321300
hfeng-pmm1SNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
hfeng-pmm1SNP*lowcmp_SimpleRepeat_triTR_51to200*
94.1176
88.8889
100.0000
95.8333
81800
hfeng-pmm1SNP*lowcmp_SimpleRepeat_triTR_51to200het
92.3077
85.7143
100.0000
95.2381
61600
hfeng-pmm1SNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.9697
20200
hfeng-pmm1SNP*map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
79.4872
1601600
hfeng-pmm1SNP*map_l100_m1_e0hetalt
100.0000
100.0000
100.0000
76.8362
4104100
hfeng-pmm1SNP*map_l100_m2_e0hetalt
100.0000
100.0000
100.0000
78.6802
4204200
hfeng-pmm1SNP*map_l100_m2_e1hetalt
100.0000
100.0000
100.0000
78.2828
4304300
hfeng-pmm1SNP*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
85.0000
90900