PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9651-9700 / 86044 show all
hfeng-pmm3SNPtitech_badpromoters*
99.4083
98.8235
100.0000
43.2432
8418400
hfeng-pmm3SNPtitech_badpromotershet
98.8506
97.7273
100.0000
44.1558
4314300
hfeng-pmm3SNPtitech_badpromotershomalt
100.0000
100.0000
100.0000
42.2535
4104100
hfeng-pmm3SNPtvHG002complexvarhetalt
99.6764
99.3548
100.0000
37.5254
308230800
hfeng-pmm3SNPtvHG002compoundhethetalt
99.8839
99.7680
100.0000
22.8700
860286000
hfeng-pmm3SNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
62.9630
1001000
hfeng-pmm3SNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
26.0096
17040170400
hfeng-pmm3SNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
82.8571
1211200
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
99.5111
99.0269
100.0000
52.7669
132313132300
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
99.2339
98.4795
100.0000
52.7497
8421384200
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
52.5173
481048100
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.6538
99.3100
100.0000
62.6082
215915215900
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.4563
98.9185
100.0000
62.5546
137215137200
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.6426
786078600
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.7214
99.4444
100.0000
67.4027
14328143200
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.5604
99.1247
100.0000
67.2096
906890600
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
67.7122
525052500
hfeng-pmm3SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
97.5000
95.1220
100.0000
91.6488
3923900
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
75.0000
11200
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
100.0000
100.0000
100.0000
87.5000
1501500
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
96.2963
92.8571
100.0000
61.1111
2622800
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
98.2558
96.5714
100.0000
67.1154
169617100
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
91.6667
84.6154
100.0000
90.9091
2242200
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
93.0233
86.9565
100.0000
75.8242
2032200
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
69.7674
1301300
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
80.9524
80800
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
66.6667
50.0000
100.0000
84.6154
22200
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm1INDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
10100
hfeng-pmm1INDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
93.1034
21200
hfeng-pmm1INDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
94.2857
21200
hfeng-pmm1INDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
94.4444
21200
hfeng-pmm1INDELI16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
85.7143
10100
hfeng-pmm1INDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
90.0000
21200
hfeng-pmm1INDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
92.0000
21200
hfeng-pmm1INDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
92.0000
21200
hfeng-pmm1INDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
hfeng-pmm1INDELI16_PLUSmap_l150_m1_e0hetalt
66.6667
50.0000
100.0000
92.8571
11100
hfeng-pmm1INDELI16_PLUSmap_l150_m2_e0hetalt
66.6667
50.0000
100.0000
93.7500
11100
hfeng-pmm1INDELI16_PLUSmap_l150_m2_e1hetalt
66.6667
50.0000
100.0000
93.7500
11100
hfeng-pmm1INDELI16_PLUSmap_sirenhetalt
96.7742
93.7500
100.0000
87.9699
1511600
hfeng-pmm1INDELI16_PLUSsegdup*
100.0000
100.0000
100.0000
95.4146
4704700
hfeng-pmm1INDELI16_PLUSsegduphet
100.0000
100.0000
100.0000
95.5140
2402400
hfeng-pmm1INDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.4026
40400
hfeng-pmm1INDELI16_PLUSsegduphomalt
100.0000
100.0000
100.0000
94.3452
1901900
hfeng-pmm1INDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
73.3333
40400
hfeng-pmm1INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
hfeng-pmm1INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200