PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 184 185 186 187 188 189 190 191 192 ... 1720 1721 » 9351-9400 / 86044 show all
hfeng-pmm3	INDEL	D6_15	map_l125_m2_e1	hetalt	94.7368	90.0000	100.0000	86.6667	18	2	18	0	0
hfeng-pmm3	INDEL	D6_15	map_l125_m2_e1	homalt	98.6301	97.2973	100.0000	86.7647	36	1	36	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m0_e0	*	100.0000	100.0000	100.0000	93.1624	32	0	32	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m0_e0	het	100.0000	100.0000	100.0000	93.6508	20	0	20	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	88.8889	5	0	5	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m0_e0	homalt	100.0000	100.0000	100.0000	93.5185	7	0	7	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m1_e0	*	99.3103	98.6301	100.0000	90.9434	72	1	72	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m1_e0	het	100.0000	100.0000	100.0000	92.5144	39	0	39	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	89.8734	8	0	8	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m1_e0	homalt	98.0392	96.1538	100.0000	87.1795	25	1	25	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e0	*	99.3865	98.7805	100.0000	90.8989	81	1	81	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e0	het	100.0000	100.0000	100.0000	92.0690	46	0	46	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	91.2088	8	0	8	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e0	homalt	98.1818	96.4286	100.0000	87.6712	27	1	27	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	90.8891	83	2	83	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e1	het	100.0000	100.0000	100.0000	92.0875	47	0	47	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e1	hetalt	94.1176	88.8889	100.0000	91.4894	8	1	8	0	0
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e1	homalt	98.2456	96.5517	100.0000	87.4439	28	1	28	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m0_e0	*	100.0000	100.0000	100.0000	97.5000	6	0	6	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m0_e0	het	100.0000	100.0000	100.0000	97.4684	4	0	4	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	96.7213	2	0	2	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m1_e0	*	100.0000	100.0000	100.0000	95.8716	18	0	18	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m1_e0	het	100.0000	100.0000	100.0000	96.2199	11	0	11	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	95.6522	2	0	2	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m1_e0	homalt	100.0000	100.0000	100.0000	94.9495	5	0	5	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e0	*	100.0000	100.0000	100.0000	95.7115	22	0	22	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e0	het	100.0000	100.0000	100.0000	95.8944	14	0	14	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	96.4912	2	0	2	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e0	homalt	100.0000	100.0000	100.0000	94.7826	6	0	6	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e1	*	100.0000	100.0000	100.0000	95.8175	22	0	22	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e1	het	100.0000	100.0000	100.0000	96.0114	14	0	14	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	96.5517	2	0	2	0	0
hfeng-pmm3	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	94.8718	6	0	6	0	0
hfeng-pmm3	INDEL	D6_15	map_siren	hetalt	96.3351	92.9293	100.0000	75.2022	92	7	92	0	0
hfeng-pmm3	INDEL	D6_15	segdup	het	97.7778	95.6522	100.0000	94.1216	88	4	88	0	0
hfeng-pmm3	INDEL	D6_15	segdup	hetalt	93.4783	87.7551	100.0000	90.3587	43	6	43	0	0
hfeng-pmm3	INDEL	D6_15	tech_badpromoters	*	93.7500	88.2353	100.0000	54.5455	15	2	15	0	0
hfeng-pmm3	INDEL	D6_15	tech_badpromoters	het	88.8889	80.0000	100.0000	55.5556	8	2	8	0	0
hfeng-pmm3	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
hfeng-pmm3	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	6	0	6	0	0
hfeng-pmm3	INDEL	I16_PLUS	HG002complexvar	het	98.6280	97.2932	100.0000	62.8860	647	18	625	0	0
hfeng-pmm3	INDEL	I16_PLUS	func_cds	*	95.6522	91.6667	100.0000	73.1707	11	1	11	0	0
hfeng-pmm3	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	57.1429	9	0	9	0	0
hfeng-pmm3	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.8889	2	0	2	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.8272	88.3721	100.0000	78.3641	76	10	82	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	84.6154	18	0	20	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	91.3043	24	0	24	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.4350	98.8764	100.0000	79.4632	176	2	176	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.0654	98.1481	100.0000	78.2881	106	2	104	0	0
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	76.7296	35	0	37	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge