PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9251-9300 / 86044 show all
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.7421
1001000
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5830
70700
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.9697
10100
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2537
20200
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.9310
95.9459
100.0000
80.5479
7137100
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9083
99.8168
100.0000
76.0545
545154500
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.6697
99.3415
100.0000
79.4752
10567105600
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.5413
99.0868
100.0000
78.2783
651665100
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.6301
97.2973
100.0000
87.0504
3613600
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
80.2674
369036900
hfeng-pmm3INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.1020
85.3602
100.0000
31.3904
1102189113000
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
77.4032
63.1365
100.0000
29.1489
31018133300
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.6436
97.3236
100.0000
71.2545
4001140100
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9990
10100
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9909
10100
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.0193
98.0576
100.0000
32.2402
146429146700
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.7987
95.6923
100.0000
23.4223
6222863100
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.7831
99.5671
100.0000
29.1217
460246000
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
38.4829
13300133000
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.4783
87.7551
100.0000
29.5082
4364300
hfeng-pmm3INDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
93.3702
1221200
hfeng-pmm3INDELD1_5map_l100_m1_e0hetalt
94.3820
89.3617
100.0000
89.9761
4254200
hfeng-pmm3INDELD1_5map_l100_m2_e0hetalt
94.5055
89.5833
100.0000
90.2655
4354400
hfeng-pmm3INDELD1_5map_l100_m2_e1hetalt
94.8454
90.1961
100.0000
89.8925
4654700
hfeng-pmm3INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.5410
30300
hfeng-pmm3INDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
95.3125
1211200
hfeng-pmm3INDELD1_5map_l125_m2_e0hetalt
92.8571
86.6667
100.0000
95.6229
1321300
hfeng-pmm3INDELD1_5map_l125_m2_e1hetalt
92.8571
86.6667
100.0000
95.7377
1321300
hfeng-pmm3INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.8261
20200
hfeng-pmm3INDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.0588
61600
hfeng-pmm3INDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.4138
61600
hfeng-pmm3INDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.0711
71700
hfeng-pmm3INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.4578
1301300
hfeng-pmm3INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.3214
30300
hfeng-pmm3INDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
92.5433
5615600
hfeng-pmm3INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.8102
30300
hfeng-pmm3INDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
93.2262
5915900
hfeng-pmm3INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.8723
30300
hfeng-pmm3INDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
93.4004
5915900
hfeng-pmm3INDELD1_5map_sirenhetalt
95.6522
91.6667
100.0000
89.9478
7777700
hfeng-pmm3INDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.3425
5025100
hfeng-pmm3INDELD1_5segduphomalt
100.0000
100.0000
100.0000
93.8242
359035900
hfeng-pmm3INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9932
10100
hfeng-pmm3INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9892
10100
hfeng-pmm3INDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
45.7143
1901900
hfeng-pmm3INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
52.9412
80800
hfeng-pmm3INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
hfeng-pmm3INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
hfeng-pmm3INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8900
10100
hfeng-pmm3INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1150
10100