PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9101-9150 / 86044 show all
jli-customINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.5075
20200
jli-customINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
87.5000
21200
jli-customINDELI16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.3146
30300
jli-customINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
88.2353
21200
jli-customINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
88.2353
21200
jli-customINDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
jli-customINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
99.1525
10100
jli-customINDELI16_PLUSmap_l150_m1_e0hetalt
66.6667
50.0000
100.0000
90.0000
11100
jli-customINDELI16_PLUSmap_l150_m1_e0homalt
100.0000
100.0000
100.0000
98.1013
30300
jli-customINDELI16_PLUSmap_l150_m2_e0hetalt
66.6667
50.0000
100.0000
90.0000
11100
jli-customINDELI16_PLUSmap_l150_m2_e0homalt
100.0000
100.0000
100.0000
98.2036
30300
jli-customINDELI16_PLUSmap_l150_m2_e1hetalt
66.6667
50.0000
100.0000
90.0000
11100
jli-customINDELI16_PLUSmap_l150_m2_e1homalt
100.0000
100.0000
100.0000
98.2143
30300
jli-customINDELI16_PLUSmap_sirenhetalt
100.0000
100.0000
100.0000
83.4951
1601700
jli-customINDELI16_PLUSmap_sirenhomalt
97.5610
95.2381
100.0000
94.4904
2012000
jli-customINDELI16_PLUSsegduphet
100.0000
100.0000
100.0000
93.6842
2402400
jli-customINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
96.7742
40400
jli-customINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
71.4286
40400
jli-customINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
jli-customINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
60.0000
20200
jli-customINDELI1_5func_cds*
100.0000
100.0000
100.0000
32.8358
180018000
jli-customINDELI1_5func_cdshet
100.0000
100.0000
100.0000
39.1753
5905900
jli-customINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
0.0000
20200
jli-customINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
29.5858
119011900
jli-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8498
10100
jli-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.5517
10100
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.9936
86.9048
100.0000
53.7975
73117300
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8445
10100
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.2963
10100
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.7742
93.7500
100.0000
71.6981
105710500
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
78.8104
5735700
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
93.5131
87.8165
100.0000
35.4839
5557758000
jli-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9932
10100
jli-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9853
10100
jli-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
97.3218
94.7834
100.0000
40.0222
107259107900
jli-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
95.4217
91.2442
100.0000
35.9756
1981921000
jli-customINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
97.8793
95.8466
100.0000
31.3501
3001330000
jli-customINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
97.7778
95.6522
100.0000
8.3333
2212200
jli-customINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
94.1935
90900
jli-customINDELI1_5map_l100_m1_e0hetalt
96.4706
93.1818
100.0000
88.8889
4134100
jli-customINDELI1_5map_l100_m2_e0hetalt
96.4706
93.1818
100.0000
89.6985
4134100
jli-customINDELI1_5map_l100_m2_e1hetalt
96.5517
93.3333
100.0000
89.6552
4234200
jli-customINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.5812
40400
jli-customINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.2000
1701700
jli-customINDELI1_5map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
93.2384
1901900
jli-customINDELI1_5map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
93.3566
1901900
jli-customINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
96.5116
30300
jli-customINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.3608
90900
jli-customINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.9641
90900
jli-customINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.6140
1001000