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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 170 171 172 173 174 175 176 177 178 ... 1720 1721 » 8651-8700 / 86044 show all
ckim-vqsr	INDEL	D6_15	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	91.8367	8	0	8	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m1_e0	homalt	98.0392	96.1538	100.0000	90.0398	25	1	25	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	92.7928	8	0	8	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e0	homalt	98.1818	96.4286	100.0000	90.2527	27	1	27	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	hetalt	94.1176	88.8889	100.0000	92.9825	8	1	8	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	homalt	98.2456	96.5517	100.0000	90.0356	28	1	28	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	*	100.0000	100.0000	100.0000	98.5782	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	het	100.0000	100.0000	100.0000	98.7179	4	0	4	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.4684	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	*	100.0000	100.0000	100.0000	97.7011	18	0	18	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	het	100.0000	100.0000	100.0000	98.1034	11	0	11	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.6667	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	homalt	100.0000	100.0000	100.0000	96.5035	5	0	5	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	*	100.0000	100.0000	100.0000	97.5637	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	het	100.0000	100.0000	100.0000	97.8979	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	97.2973	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	homalt	100.0000	100.0000	100.0000	96.3190	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	*	100.0000	100.0000	100.0000	97.6293	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	het	100.0000	100.0000	100.0000	97.9622	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	96.3855	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_siren	hetalt	96.8750	93.9394	100.0000	75.7180	93	6	93	0	0
ckim-vqsr	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4968	44	5	44	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	51.4286	17	0	17	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	52.3810	10	0	10	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	het	98.7823	97.5940	100.0000	64.8679	649	16	625	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	*	95.6522	91.6667	100.0000	77.5510	11	1	11	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	70.0000	9	0	9	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.1677	87.2093	100.0000	76.4205	75	11	83	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m1_e0	homalt	80.0000	66.6667	100.0000	97.8261	2	1	2	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m2_e0	homalt	80.0000	66.6667	100.0000	97.9592	2	1	2	0	0
dgrover-gatk	INDEL	I6_15	map_l250_m2_e1	homalt	80.0000	66.6667	100.0000	98.0769	2	1	2	0	0
dgrover-gatk	INDEL	I6_15	map_siren	hetalt	97.8723	95.8333	100.0000	78.5047	69	3	69	0	0
dgrover-gatk	INDEL	I6_15	segdup	*	99.4253	98.8571	100.0000	92.8894	173	2	173	0	0
dgrover-gatk	INDEL	I6_15	segdup	het	99.3939	98.7952	100.0000	93.9394	82	1	82	0	0
dgrover-gatk	INDEL	I6_15	segdup	hetalt	98.8764	97.7778	100.0000	89.8851	44	1	44	0	0
dgrover-gatk	INDEL	I6_15	segdup	homalt	100.0000	100.0000	100.0000	92.7132	47	0	47	0	0
dgrover-gatk	INDEL	I6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	56.6667	13	0	13	0	0
dgrover-gatk	INDEL	I6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	56.2500	7	0	7	0	0
dgrover-gatk	INDEL	I6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	3	0	3	0	0
dgrover-gatk	INDEL	I6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	62.5000	3	0	3	0	0
dgrover-gatk	SNP	*	*	hetalt	99.8275	99.6556	100.0000	41.6667	868	3	868	0	0
dgrover-gatk	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.3636	308	2	308	0	0
dgrover-gatk	SNP	*	HG002compoundhet	hetalt	99.8257	99.6520	100.0000	22.7518	859	3	859	0	0
dgrover-gatk	SNP	*	func_cds	hetalt	100.0000	100.0000	100.0000	58.3333	10	0	10	0	0
dgrover-gatk	SNP	*	func_cds	homalt	99.9785	99.9570	100.0000	20.9966	6976	3	6976	0	0
dgrover-gatk	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	83.0986	12	1	12	0	0

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