PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
8351-8400 / 86044 show all
egarrison-hhgaINDELI6_15map_l125_m2_e1het
90.9091
83.3333
100.0000
90.9747
2552500
egarrison-hhgaINDELI6_15map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
89.4737
80800
egarrison-hhgaINDELI6_15map_l125_m2_e1homalt
100.0000
100.0000
100.0000
90.1316
1501500
egarrison-hhgaINDELI6_15map_l150_m0_e0*
85.7143
75.0000
100.0000
96.3190
62600
egarrison-hhgaINDELI6_15map_l150_m0_e0het
66.6667
50.0000
100.0000
98.1132
22200
egarrison-hhgaINDELI6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
90.6977
40400
egarrison-hhgaINDELI6_15map_l150_m1_e0*
91.3043
84.0000
100.0000
93.6556
2142100
egarrison-hhgaINDELI6_15map_l150_m1_e0het
84.6154
73.3333
100.0000
94.5000
1141100
egarrison-hhgaINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.6667
30300
egarrison-hhgaINDELI6_15map_l150_m1_e0homalt
100.0000
100.0000
100.0000
92.6316
70700
egarrison-hhgaINDELI6_15map_l150_m2_e0*
91.3043
84.0000
100.0000
94.5312
2142100
egarrison-hhgaINDELI6_15map_l150_m2_e0het
84.6154
73.3333
100.0000
94.9772
1141100
egarrison-hhgaINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
94.2308
30300
egarrison-hhgaINDELI6_15map_l150_m2_e0homalt
100.0000
100.0000
100.0000
93.8053
70700
egarrison-hhgaINDELI6_15map_l150_m2_e1*
92.0000
85.1852
100.0000
94.2643
2342300
egarrison-hhgaINDELI6_15map_l150_m2_e1het
85.7143
75.0000
100.0000
94.7137
1241200
egarrison-hhgaINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
94.4444
30300
egarrison-hhgaINDELI6_15map_l150_m2_e1homalt
100.0000
100.0000
100.0000
93.3333
80800
egarrison-hhgaINDELI6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
98.9583
10100
egarrison-hhgaINDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.0000
10100
egarrison-hhgaINDELI6_15map_l250_m1_e0*
92.3077
85.7143
100.0000
97.0732
61600
egarrison-hhgaINDELI6_15map_l250_m1_e0het
85.7143
75.0000
100.0000
97.5610
31300
egarrison-hhgaINDELI6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
95.3125
30300
egarrison-hhgaINDELI6_15map_l250_m2_e0*
93.3333
87.5000
100.0000
96.9432
71700
egarrison-hhgaINDELI6_15map_l250_m2_e0het
88.8889
80.0000
100.0000
97.1014
41400
egarrison-hhgaINDELI6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
95.5882
30300
egarrison-hhgaINDELI6_15map_l250_m2_e1*
93.3333
87.5000
100.0000
97.0588
71700
egarrison-hhgaINDELI6_15map_l250_m2_e1het
88.8889
80.0000
100.0000
97.1831
41400
egarrison-hhgaINDELI6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
95.7746
30300
egarrison-hhgaINDELI6_15segdup*
98.8439
97.7143
100.0000
91.5010
171417100
egarrison-hhgaINDELI6_15segduphet
99.3939
98.7952
100.0000
92.1830
8218200
egarrison-hhgaINDELI6_15segduphetalt
98.8764
97.7778
100.0000
89.8851
4414400
egarrison-hhgaINDELI6_15segduphomalt
97.8261
95.7447
100.0000
91.4773
4524500
egarrison-hhgaINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
58.0645
1301300
egarrison-hhgaINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
egarrison-hhgaINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
egarrison-hhgaINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
30300
egarrison-hhgaSNP*func_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
egarrison-hhgaSNP*func_cdshomalt
99.9857
99.9713
100.0000
22.5036
69772697700
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.7536
1501500
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
10100
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.1538
30300
egarrison-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
92.7536
1501500
egarrison-hhgaSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.0000
10100
egarrison-hhgaSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
73.6842
50500
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
egarrison-hhgaSNP*lowcmp_SimpleRepeat_triTR_51to200*
80.0000
66.6667
100.0000
95.9459
63600