PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7651-7700 / 86044 show all
ckim-isaacINDELI1_5map_l250_m2_e1het
80.0000
66.6667
100.0000
97.6866
44224400
ckim-isaacINDELI1_5map_l250_m2_e1hetalt
66.6667
50.0000
100.0000
99.0000
11100
ckim-isaacINDELI1_5map_l250_m2_e1homalt
66.6667
50.0000
100.0000
94.0568
23232300
ckim-isaacINDELI1_5segduphetalt
92.1348
85.4167
100.0000
94.7165
4174100
ckim-isaacINDELI1_5tech_badpromoters*
95.2381
90.9091
100.0000
51.2195
2022000
ckim-isaacINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
ckim-isaacINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ckim-isaacINDELI1_5tech_badpromotershomalt
91.6667
84.6154
100.0000
54.1667
1121100
ckim-isaacINDELI6_15func_cds*
91.1392
83.7209
100.0000
33.3333
3673600
ckim-isaacINDELI6_15func_cdshet
93.3333
87.5000
100.0000
34.3750
2132100
ckim-isaacINDELI6_15func_cdshetalt
66.6667
50.0000
100.0000
33.3333
22200
ckim-isaacINDELI6_15func_cdshomalt
92.8571
86.6667
100.0000
31.5789
1321300
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
92.0635
85.2941
100.0000
55.3846
58105800
ckim-isaacINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
68.0000
51.5152
100.0000
41.2979
18717619900
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
52.8000
35.8696
100.0000
62.5000
33593300
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
50.4505
33.7349
100.0000
36.5385
28553300
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
60.8295
43.7086
100.0000
34.7826
66857500
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
70.0000
53.8462
100.0000
53.3333
76700
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
66.6667
50.0000
100.0000
12.5000
66700
ckim-isaacINDELI6_15map_l100_m0_e0*
53.3333
36.3636
100.0000
94.2857
12211200
ckim-isaacINDELI6_15map_l100_m0_e0het
58.3333
41.1765
100.0000
96.3636
710600
ckim-isaacINDELI6_15map_l100_m0_e0hetalt
85.7143
75.0000
100.0000
80.9524
31400
ckim-isaacINDELI6_15map_l100_m0_e0homalt
28.5714
16.6667
100.0000
91.6667
210200
ckim-isaacINDELI6_15map_l100_m1_e0hetalt
70.5882
54.5455
100.0000
82.1918
12101300
ckim-isaacINDELI6_15map_l100_m1_e0homalt
39.0244
24.2424
100.0000
90.0000
825800
ckim-isaacINDELI6_15map_l100_m2_e0hetalt
70.5882
54.5455
100.0000
84.1463
12101300
ckim-isaacINDELI6_15map_l100_m2_e0homalt
39.0244
24.2424
100.0000
90.8046
825800
ckim-isaacINDELI6_15map_l100_m2_e1hetalt
70.5882
54.5455
100.0000
84.7059
12101300
ckim-isaacINDELI6_15map_l100_m2_e1homalt
39.0244
24.2424
100.0000
90.9091
825800
ckim-isaacINDELI6_15map_l125_m0_e0*
50.0000
33.3333
100.0000
96.7949
510500
ckim-isaacINDELI6_15map_l125_m0_e0het
50.0000
33.3333
100.0000
98.4252
36200
ckim-isaacINDELI6_15map_l125_m0_e0hetalt
0.0000
0.0000
100.0000
92.8571
00100
ckim-isaacINDELI6_15map_l125_m0_e0homalt
50.0000
33.3333
100.0000
86.6667
24200
ckim-isaacINDELI6_15map_l125_m1_e0*
50.7042
33.9623
100.0000
94.6903
18351800
ckim-isaacINDELI6_15map_l125_m1_e0het
46.1538
30.0000
100.0000
96.7611
921800
ckim-isaacINDELI6_15map_l125_m1_e0hetalt
85.7143
75.0000
100.0000
84.0909
62700
ckim-isaacINDELI6_15map_l125_m1_e0homalt
33.3333
20.0000
100.0000
93.7500
312300
ckim-isaacINDELI6_15map_l125_m2_e0*
50.7042
33.9623
100.0000
95.3368
18351800
ckim-isaacINDELI6_15map_l125_m2_e0het
46.1538
30.0000
100.0000
97.0803
921800
ckim-isaacINDELI6_15map_l125_m2_e0hetalt
85.7143
75.0000
100.0000
87.5000
62700
ckim-isaacINDELI6_15map_l125_m2_e0homalt
33.3333
20.0000
100.0000
94.6429
312300
ckim-isaacINDELI6_15map_l125_m2_e1*
50.7042
33.9623
100.0000
95.4774
18351800
ckim-isaacINDELI6_15map_l125_m2_e1het
46.1538
30.0000
100.0000
97.1326
921800
ckim-isaacINDELI6_15map_l125_m2_e1hetalt
85.7143
75.0000
100.0000
88.1356
62700
ckim-isaacINDELI6_15map_l125_m2_e1homalt
33.3333
20.0000
100.0000
95.0000
312300
ckim-isaacINDELI6_15map_l150_m0_e0*
54.5455
37.5000
100.0000
97.7612
35300
ckim-isaacINDELI6_15map_l150_m0_e0het
66.6667
50.0000
100.0000
98.1982
22200
ckim-isaacINDELI6_15map_l150_m0_e0homalt
40.0000
25.0000
100.0000
91.6667
13100
ckim-isaacINDELI6_15map_l150_m1_e0*
38.7097
24.0000
100.0000
97.4265
619700
ckim-isaacINDELI6_15map_l150_m1_e0het
33.3333
20.0000
100.0000
98.5294
312300