PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
74451-74500 / 86044 show all
ltrigg-rtg2INDELI16_PLUSmap_l250_m0_e0*
0.0000
0.0000
91.6667
00010
0.0000
ltrigg-rtg2INDELI16_PLUSmap_l250_m0_e0het
0.0000
0.0000
83.3333
00010
0.0000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSmap_l100_m1_e0*
0.0000
0.0000
96.7742
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l100_m1_e0het
0.0000
0.0000
93.7500
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l100_m2_e0*
0.0000
0.0000
97.1429
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l100_m2_e0het
0.0000
0.0000
94.1176
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l100_m2_e1*
0.0000
0.0000
97.2222
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l100_m2_e1het
0.0000
0.0000
94.4444
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_l250_m0_e0het
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSmap_l250_m0_e0homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSmap_siren*
0.0000
0.0000
98.5507
00011
100.0000
ltrigg-rtg1INDELC16_PLUSmap_sirenhet
0.0000
0.0000
97.2973
00011
100.0000
ltrigg-rtg1INDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
88.8889
00011
100.0000
ltrigg-rtg1INDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5tech_badpromoters*
0.0000
0.0000
50.0000
00010
0.0000
ltrigg-rtg1INDELC1_5tech_badpromotershet
0.0000
0.0000
0.0000
00010
0.0000
ltrigg-rtg1INDELC1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC6_15HG002compoundhethomalt
0.0000
0.0000
96.1538
00011
100.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
93.3333
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
87.5000
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
92.8571
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
87.5000
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
97.6190
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
98.8764
00011
100.0000
ltrigg-rtg1INDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000