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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 145 146 147 148 149 150 151 152 153 ... 1720 1721 » 7401-7450 / 86044 show all
dgrover-gatk	INDEL	I1_5	func_cds	homalt	100.0000	100.0000	100.0000	30.4094	119	0	119	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8652	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	97.0588	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	93.6709	88.0952	100.0000	59.7826	74	10	74	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8599	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.7742	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.1818	96.4286	100.0000	75.2860	108	4	108	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	81.5047	59	1	59	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.9721	86.8671	100.0000	38.2637	549	83	576	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9934	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.9846	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.8372	97.7011	100.0000	42.5246	1105	26	1111	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	97.3995	94.9309	100.0000	39.5543	206	11	217	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6795	99.3610	100.0000	35.3430	311	2	311	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.7778	95.6522	100.0000	12.0000	22	1	22	0	0
dgrover-gatk	INDEL	I1_5	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	94.1935	9	0	9	0	0
dgrover-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.7701	42	2	42	0	0
dgrover-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.6552	42	2	42	0	0
dgrover-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	97.7273	95.5556	100.0000	89.6135	43	2	43	0	0
dgrover-gatk	INDEL	I1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	96.4286	4	0	4	0	0
dgrover-gatk	INDEL	I1_5	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	93.3333	17	0	17	0	0
dgrover-gatk	INDEL	I1_5	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	93.4483	19	0	19	0	0
dgrover-gatk	INDEL	I1_5	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	93.5593	19	0	19	0	0
dgrover-gatk	INDEL	I1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	96.3415	3	0	3	0	0
dgrover-gatk	INDEL	I1_5	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	95.3125	9	0	9	0	0
dgrover-gatk	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	95.9459	9	0	9	0	0
dgrover-gatk	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	95.6140	10	0	10	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m0_e0	het	88.8889	80.0000	100.0000	98.7302	12	3	12	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.0583	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.4496	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.4733	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	map_siren	hetalt	98.6425	97.3214	100.0000	87.4713	109	3	109	0	0
dgrover-gatk	INDEL	I1_5	segdup	hetalt	97.8723	95.8333	100.0000	96.0963	46	2	47	0	0
dgrover-gatk	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	54.1667	22	0	22	0	0
dgrover-gatk	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
dgrover-gatk	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
dgrover-gatk	INDEL	I6_15	HG002complexvar	hetalt	97.3563	94.8487	100.0000	56.1679	1160	63	1201	0	0
dgrover-gatk	INDEL	I6_15	func_cds	het	100.0000	100.0000	100.0000	38.4615	24	0	24	0	0
dgrover-gatk	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	25.0000	3	1	3	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1132	96.2963	100.0000	79.3103	78	3	78	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.0901	81.9672	100.0000	54.1284	50	11	50	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4318	98.8701	100.0000	74.3777	175	2	175	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	99.4083	98.8235	100.0000	57.0707	84	1	85	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	100.0000	100.0000	100.0000	69.5107	242	0	243	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	71.9540	122	0	122	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	59.2308	52	0	53	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	70.6897	68	0	68	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.0228	98.0645	100.0000	82.5740	152	3	153	0	0
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.1870	98.3871	100.0000	85.9091	61	1	62	0	0

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