PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1482 1483 1484 1485 1486 1487 1488 1489 1490 ... 1720 1721 » 74251-74300 / 86044 show all
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_triTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	map_l100_m0_e0	hetalt	0.0000	0.0000	0.0000	0	16	0	0	0
jpowers-varprowl	SNP	*	map_l100_m1_e0	hetalt	0.0000	0.0000	0.0000	0	41	0	0	0
jpowers-varprowl	SNP	*	map_l100_m2_e0	hetalt	0.0000	0.0000	0.0000	0	42	0	0	0
jpowers-varprowl	SNP	*	map_l100_m2_e1	hetalt	0.0000	0.0000	0.0000	0	43	0	0	0
jpowers-varprowl	SNP	*	map_l125_m0_e0	hetalt	0.0000	0.0000	0.0000	0	9	0	0	0
jpowers-varprowl	SNP	*	map_l125_m1_e0	hetalt	0.0000	0.0000	0.0000	0	30	0	0	0
jpowers-varprowl	SNP	*	map_l125_m2_e0	hetalt	0.0000	0.0000	0.0000	0	30	0	0	0
jpowers-varprowl	SNP	*	map_l125_m2_e1	hetalt	0.0000	0.0000	0.0000	0	30	0	0	0
jpowers-varprowl	SNP	*	map_l150_m0_e0	hetalt	0.0000	0.0000	0.0000	0	3	0	0	0
jpowers-varprowl	SNP	*	map_l150_m1_e0	hetalt	0.0000	0.0000	0.0000	0	20	0	0	0
jpowers-varprowl	SNP	*	map_l150_m2_e0	hetalt	0.0000	0.0000	0.0000	0	20	0	0	0
jpowers-varprowl	SNP	*	map_l150_m2_e1	hetalt	0.0000	0.0000	0.0000	0	20	0	0	0
jpowers-varprowl	SNP	*	map_l250_m0_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	map_l250_m1_e0	hetalt	0.0000	0.0000	0.0000	0	4	0	0	0
jpowers-varprowl	SNP	*	map_l250_m2_e0	hetalt	0.0000	0.0000	0.0000	0	5	0	0	0
jpowers-varprowl	SNP	*	map_l250_m2_e1	hetalt	0.0000	0.0000	0.0000	0	5	0	0	0
jpowers-varprowl	SNP	*	map_siren	hetalt	0.0000	0.0000	0.0000	0	81	0	0	0
jpowers-varprowl	SNP	*	segdup	hetalt	0.0000	0.0000	0.0000	0	7	0	0	0
jpowers-varprowl	SNP	*	segdupwithalt	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	*	hetalt	0.0000	0.0000	0.0000	0	582	0	0	0
jpowers-varprowl	SNP	ti	HG002complexvar	hetalt	0.0000	0.0000	0.0000	0	207	0	0	0
jpowers-varprowl	SNP	ti	HG002compoundhet	hetalt	0.0000	0.0000	0.0000	0	579	0	0	0
jpowers-varprowl	SNP	ti	decoy	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	func_cds	hetalt	0.0000	0.0000	0.0000	0	8	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	6	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.0000	0.0000	0	12	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.0000	0.0000	0	12	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge