PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7151-7200 / 86044 show all
eyeh-varpipeINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
40.0000
25.0000
100.0000
98.3333
13100
eyeh-varpipeINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.1429
10100
eyeh-varpipeINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
40.0000
25.0000
100.0000
98.3051
13100
eyeh-varpipeINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.1429
10100
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
50.0000
33.3333
100.0000
87.8049
361000
eyeh-varpipeINDELD16_PLUSmap_l100_m1_e0hetalt
14.2857
7.6923
100.0000
93.3333
224200
eyeh-varpipeINDELD16_PLUSmap_l100_m2_e0hetalt
14.2857
7.6923
100.0000
93.7500
224200
eyeh-varpipeINDELD16_PLUSmap_l100_m2_e1hetalt
12.5000
6.6667
100.0000
93.7500
228200
eyeh-varpipeINDELD16_PLUSmap_l125_m1_e0hetalt
50.0000
33.3333
100.0000
93.7500
12100
eyeh-varpipeINDELD16_PLUSmap_l125_m2_e0hetalt
50.0000
33.3333
100.0000
94.4444
12100
eyeh-varpipeINDELD16_PLUSmap_l125_m2_e1hetalt
40.0000
25.0000
100.0000
94.4444
13100
eyeh-varpipeINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
100.0000
90.9091
01100
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e0hetalt
0.0000
0.0000
100.0000
90.9091
01100
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
100.0000
90.9091
02100
eyeh-varpipeINDELD16_PLUSmap_l250_m0_e0*
100.0000
100.0000
100.0000
98.1132
10100
eyeh-varpipeINDELD16_PLUSmap_l250_m0_e0het
100.0000
100.0000
100.0000
96.2963
10100
eyeh-varpipeINDELD16_PLUSmap_l250_m1_e0het
100.0000
100.0000
100.0000
93.3333
30300
eyeh-varpipeINDELD16_PLUSmap_l250_m2_e0het
100.0000
100.0000
100.0000
93.7500
30300
eyeh-varpipeINDELD16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
93.7500
30300
eyeh-varpipeINDELD16_PLUSsegduphetalt
20.0000
11.1111
100.0000
98.0000
18100
eyeh-varpipeINDELD16_PLUStech_badpromotershet
66.6667
50.0000
100.0000
50.0000
22200
eyeh-varpipeINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.8141
20700
eyeh-varpipeINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6732
10100
eyeh-varpipeINDELD1_5func_cdshomalt
98.6301
97.2973
100.0000
24.2105
7227200
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
93.3333
87.5000
100.0000
98.5889
711500
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7013
10100
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5075
701500
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.5915
10100
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
11.5385
6.1224
100.0000
80.9524
346400
eyeh-varpipeINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.2441
30800
eyeh-varpipeINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3333
20400
eyeh-varpipeINDELD1_5map_l150_m1_e0hetalt
72.7273
57.1429
100.0000
96.8641
43900
eyeh-varpipeINDELD1_5map_l150_m2_e0hetalt
72.7273
57.1429
100.0000
96.9789
431000
eyeh-varpipeINDELD1_5map_l150_m2_e1hetalt
76.9231
62.5000
100.0000
96.7552
531100
eyeh-varpipeINDELD1_5map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
98.7179
21200
eyeh-varpipeINDELD1_5map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
98.9071
21200
eyeh-varpipeINDELD1_5map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
98.9362
21200
eyeh-varpipeINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9794
10300
eyeh-varpipeINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9761
10200
eyeh-varpipeINDELD1_5segdupwithalthetalt
0.0000
0.0000
100.0000
99.8771
00100
eyeh-varpipeINDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
52.9412
80800
eyeh-varpipeINDELD6_15decoy*
100.0000
100.0000
100.0000
99.7758
10200
eyeh-varpipeINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.8073
00100
eyeh-varpipeINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1525
10100
eyeh-varpipeINDELD6_15func_cdshetalt
66.6667
50.0000
100.0000
66.6667
11200
eyeh-varpipeINDELD6_15func_cdshomalt
85.7143
75.0000
100.0000
58.3333
931000
dgrover-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.2840
60600
dgrover-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.3344
40400
dgrover-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.0148
20200
dgrover-gatkINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
80.3279
1201200