PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
7051-7100 / 86044 show all | |||||||||||||||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | het | 0.0000 | 0.0000 | 100.0000 | 96.7391 | 0 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.7261 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_6to10 | * | 0.0000 | 0.0000 | 100.0000 | 92.0000 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_6to10 | het | 0.0000 | 0.0000 | 100.0000 | 91.6667 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_6to10 | homalt | 0.0000 | 0.0000 | 100.0000 | 90.9091 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_quadTR_11to50 | het | 0.0000 | 0.0000 | 100.0000 | 93.3333 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | * | 0.0000 | 0.0000 | 100.0000 | 90.9091 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | het | 0.0000 | 0.0000 | 100.0000 | 83.3333 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 0.0000 | 0.0000 | 100.0000 | 85.7143 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | segdup | * | 0.0000 | 0.0000 | 100.0000 | 98.2456 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C16_PLUS | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 96.2963 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | func_cds | * | 0.0000 | 0.0000 | 100.0000 | 95.0000 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | func_cds | homalt | 0.0000 | 0.0000 | 100.0000 | 88.8889 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | lowcmp_SimpleRepeat_diTR_51to200 | het | 0.0000 | 0.0000 | 100.0000 | 93.3333 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.6549 | 0 | 0 | 8 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.0291 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.3488 | 0 | 0 | 14 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l100_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.2456 | 0 | 0 | 4 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l100_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.4064 | 0 | 0 | 4 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l100_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.4436 | 0 | 0 | 4 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.3052 | 0 | 0 | 10 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.6667 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 94.5312 | 0 | 0 | 21 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.8304 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.0472 | 0 | 0 | 21 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 98.8571 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l125_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 94.9309 | 0 | 0 | 22 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.8333 | 0 | 0 | 7 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.1071 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.6811 | 0 | 0 | 13 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.2000 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.8457 | 0 | 0 | 14 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.2126 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.6647 | 0 | 0 | 15 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m0_e0 | * | 0.0000 | 0.0000 | 100.0000 | 99.2754 | 0 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m0_e0 | het | 0.0000 | 0.0000 | 100.0000 | 99.4083 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.8372 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m1_e0 | * | 0.0000 | 0.0000 | 100.0000 | 98.2318 | 0 | 0 | 9 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m1_e0 | het | 0.0000 | 0.0000 | 100.0000 | 97.9239 | 0 | 0 | 6 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.1132 | 0 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m2_e0 | * | 0.0000 | 0.0000 | 100.0000 | 98.4014 | 0 | 0 | 9 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m2_e0 | het | 0.0000 | 0.0000 | 100.0000 | 98.1073 | 0 | 0 | 6 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.3146 | 0 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m2_e1 | * | 0.0000 | 0.0000 | 100.0000 | 98.4483 | 0 | 0 | 9 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m2_e1 | het | 0.0000 | 0.0000 | 100.0000 | 98.1481 | 0 | 0 | 6 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | map_l250_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 98.3784 | 0 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | segdup | het | 0.0000 | 0.0000 | 100.0000 | 99.2437 | 0 | 0 | 9 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 98.7326 | 0 | 0 | 10 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | segdupwithalt | * | 0.0000 | 0.0000 | 100.0000 | 99.9486 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | segdupwithalt | het | 0.0000 | 0.0000 | 100.0000 | 99.8972 | 0 | 0 | 1 | 0 | 0 | ||