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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7001-7050 / 86044 show all
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.1538
30300
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
92.7536
1501500
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.0000
10100
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_diTR_51to200het
86.6667
76.4706
100.0000
95.1493
1341300
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
73.6842
50500
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_11to50homalt
99.8472
99.6949
100.0000
35.4886
13074130700
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
97.7778
10100
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.1429
10100
egarrison-hhgaSNPtvmap_l125_m0_e0hetalt
87.5000
77.7778
100.0000
88.1356
72700
egarrison-hhgaSNPtvmap_l125_m1_e0hetalt
96.5517
93.3333
100.0000
78.2946
2822800
egarrison-hhgaSNPtvmap_l125_m2_e0hetalt
96.5517
93.3333
100.0000
81.3333
2822800
egarrison-hhgaSNPtvmap_l125_m2_e1hetalt
96.5517
93.3333
100.0000
81.4570
2822800
egarrison-hhgaSNPtvmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
93.8776
30300
egarrison-hhgaSNPtvmap_l150_m1_e0hetalt
94.7368
90.0000
100.0000
82.0000
1821800
egarrison-hhgaSNPtvmap_l150_m2_e0hetalt
94.7368
90.0000
100.0000
84.6154
1821800
egarrison-hhgaSNPtvmap_l150_m2_e1hetalt
94.7368
90.0000
100.0000
84.8739
1821800
egarrison-hhgaSNPtvmap_l250_m1_e0hetalt
66.6667
50.0000
100.0000
95.9184
22200
egarrison-hhgaSNPtvmap_l250_m2_e0hetalt
75.0000
60.0000
100.0000
95.0820
32300
egarrison-hhgaSNPtvmap_l250_m2_e1hetalt
75.0000
60.0000
100.0000
95.0820
32300
egarrison-hhgaSNPtvsegduphetalt
100.0000
100.0000
100.0000
97.8528
70700
egarrison-hhgaSNPtvtech_badpromotershomalt
100.0000
100.0000
100.0000
54.6512
3903900
eyeh-varpipeINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.7080
10200
eyeh-varpipeINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
50.0000
33.3333
100.0000
98.8764
12200
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
50.0000
33.3333
100.0000
98.7805
12200
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
80.0000
66.6667
100.0000
99.0148
21200
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
66.6667
50.0000
100.0000
99.0291
11100
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
96.4286
10100
eyeh-varpipeINDEL*map_l125_m0_e0hetalt
70.5882
54.5455
100.0000
94.3694
652500
eyeh-varpipeINDEL*map_l150_m0_e0hetalt
71.4286
55.5556
100.0000
96.7320
541000
eyeh-varpipeINDEL*map_l150_m1_e0hetalt
72.7273
57.1429
100.0000
95.1342
1292900
eyeh-varpipeINDEL*map_l150_m2_e0hetalt
72.7273
57.1429
100.0000
95.4210
1293100
eyeh-varpipeINDEL*map_l150_m2_e1hetalt
72.2222
56.5217
100.0000
95.3556
13103200
eyeh-varpipeINDEL*map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
98.0198
33600
eyeh-varpipeINDEL*map_l250_m2_e0hetalt
66.6667
50.0000
100.0000
97.7591
33800
eyeh-varpipeINDEL*map_l250_m2_e1hetalt
66.6667
50.0000
100.0000
97.8022
33800
eyeh-varpipeINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9901
10600
eyeh-varpipeINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9726
10500
eyeh-varpipeINDEL*segdupwithalthetalt
0.0000
0.0000
100.0000
99.9431
00100
eyeh-varpipeINDEL*tech_badpromotershetalt
66.6667
50.0000
100.0000
77.7778
22200
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
95.5307
00800
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
93.7500
00100
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
93.3333
00200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
93.1034
00200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
0.0000
0.0000
100.0000
92.6829
00300
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
90.0000
00200
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
94.1176
00100
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
96.7033
00300
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
97.5000
00300