PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1357 1358 1359 1360 1361 1362 1363 1364 1365 ... 1720 1721 » 68001-68050 / 86044 show all
ciseli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	81.8182	0	1	0	2	0	0.0000
ciseli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	88.8889	0	1	0	1	0	0.0000
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.0000	66.6667	0	1	0	5	2	40.0000
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I16_PLUS	map_l250_m0_e0	*	0.0000	0.0000	98.3607	0	0	0	1	0	0.0000
ckim-dragen	INDEL	I16_PLUS	map_l250_m0_e0	het	0.0000	0.0000	98.0769	0	0	0	1	0	0.0000
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	*	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge