PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6501-6550 / 86044 show all | |||||||||||||||
bgallagher-sentieon | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_11to50 | het | 99.7147 | 99.4310 | 100.0000 | 46.1064 | 699 | 4 | 699 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 99.8285 | 99.6575 | 100.0000 | 18.1180 | 582 | 2 | 583 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 97.8947 | 95.8763 | 100.0000 | 23.1405 | 93 | 4 | 93 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 100.0000 | 100.0000 | 100.0000 | 36.3636 | 21 | 0 | 21 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l100_m0_e0 | homalt | 97.8723 | 95.8333 | 100.0000 | 90.4564 | 23 | 1 | 23 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l100_m1_e0 | homalt | 98.4127 | 96.8750 | 100.0000 | 86.6953 | 62 | 2 | 62 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l100_m2_e0 | homalt | 98.4375 | 96.9231 | 100.0000 | 87.2211 | 63 | 2 | 63 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l100_m2_e1 | homalt | 98.4848 | 97.0149 | 100.0000 | 87.1287 | 65 | 2 | 65 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m0_e0 | * | 98.9247 | 97.8723 | 100.0000 | 93.8667 | 46 | 1 | 46 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m0_e0 | het | 98.2456 | 96.5517 | 100.0000 | 94.6257 | 28 | 1 | 28 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 6 | 0 | 6 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 92.8994 | 12 | 0 | 12 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m1_e0 | hetalt | 97.2973 | 94.7368 | 100.0000 | 84.4828 | 18 | 1 | 18 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m1_e0 | homalt | 98.5075 | 97.0588 | 100.0000 | 89.2857 | 33 | 1 | 33 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m2_e0 | hetalt | 97.2973 | 94.7368 | 100.0000 | 86.3636 | 18 | 1 | 18 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m2_e0 | homalt | 98.5915 | 97.2222 | 100.0000 | 89.3939 | 35 | 1 | 35 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m2_e1 | hetalt | 94.7368 | 90.0000 | 100.0000 | 86.7647 | 18 | 2 | 18 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l125_m2_e1 | homalt | 98.6301 | 97.2973 | 100.0000 | 89.3491 | 36 | 1 | 36 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 94.7967 | 32 | 0 | 32 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 95.3271 | 20 | 0 | 20 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 5 | 0 | 5 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 94.8905 | 7 | 0 | 7 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 90.3614 | 8 | 0 | 8 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m1_e0 | homalt | 98.0392 | 96.1538 | 100.0000 | 89.5833 | 25 | 1 | 25 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 91.4894 | 8 | 0 | 8 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m2_e0 | homalt | 98.1818 | 96.4286 | 100.0000 | 89.8876 | 27 | 1 | 27 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m2_e1 | hetalt | 94.1176 | 88.8889 | 100.0000 | 91.7526 | 8 | 1 | 8 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l150_m2_e1 | homalt | 98.2456 | 96.5517 | 100.0000 | 89.6679 | 28 | 1 | 28 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.1595 | 6 | 0 | 6 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 98.2222 | 4 | 0 | 4 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.3684 | 2 | 0 | 2 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m1_e0 | * | 100.0000 | 100.0000 | 100.0000 | 96.9595 | 18 | 0 | 18 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m1_e0 | het | 100.0000 | 100.0000 | 100.0000 | 97.3105 | 11 | 0 | 11 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.9184 | 2 | 0 | 2 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.2687 | 5 | 0 | 5 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e0 | * | 100.0000 | 100.0000 | 100.0000 | 96.7742 | 22 | 0 | 22 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e0 | het | 100.0000 | 100.0000 | 100.0000 | 97.0213 | 14 | 0 | 14 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.6667 | 2 | 0 | 2 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.0526 | 6 | 0 | 6 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e1 | * | 100.0000 | 100.0000 | 100.0000 | 96.8571 | 22 | 0 | 22 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e1 | het | 100.0000 | 100.0000 | 100.0000 | 97.1014 | 14 | 0 | 14 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.7213 | 2 | 0 | 2 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.1538 | 6 | 0 | 6 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | segdup | hetalt | 93.4783 | 87.7551 | 100.0000 | 90.0463 | 43 | 6 | 43 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 17 | 0 | 17 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 50.0000 | 10 | 0 | 10 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | tech_badpromoters | hetalt | 100.0000 | 100.0000 | 100.0000 | 0.0000 | 1 | 0 | 1 | 0 | 0 | ||
bgallagher-sentieon | INDEL | D6_15 | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 53.8462 | 6 | 0 | 6 | 0 | 0 | ||
bgallagher-sentieon | INDEL | I16_PLUS | HG002complexvar | het | 99.3949 | 98.7970 | 100.0000 | 64.2575 | 657 | 8 | 633 | 0 | 0 | ||
bgallagher-sentieon | INDEL | I16_PLUS | HG002compoundhet | hetalt | 95.0877 | 90.6355 | 100.0000 | 45.8521 | 1897 | 196 | 1919 | 0 | 0 |