PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6451-6500 / 86044 show all
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3443
20200
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
81.9472
369036900
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.1481
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.3684
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9912
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.8452
13300133000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.4783
87.7551
100.0000
25.8621
4364300
bgallagher-sentieonINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.4576
30300
bgallagher-sentieonINDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
95.2569
1211200
bgallagher-sentieonINDELD1_5map_l125_m2_e0hetalt
96.5517
93.3333
100.0000
95.2055
1411400
bgallagher-sentieonINDELD1_5map_l125_m2_e1hetalt
96.5517
93.3333
100.0000
95.3177
1411400
bgallagher-sentieonINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.7011
20200
bgallagher-sentieonINDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.0297
61600
bgallagher-sentieonINDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.3799
61600
bgallagher-sentieonINDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.0213
71700
bgallagher-sentieonINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3085
1301300
bgallagher-sentieonINDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.1429
30300
bgallagher-sentieonINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
94.2387
5615600
bgallagher-sentieonINDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.6744
30300
bgallagher-sentieonINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
94.6895
5915900
bgallagher-sentieonINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.7444
30300
bgallagher-sentieonINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
94.8381
5915900
bgallagher-sentieonINDELD1_5segduphetalt
99.0291
98.0769
100.0000
95.2425
5115200
bgallagher-sentieonINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9942
10100
bgallagher-sentieonINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9912
10100
bgallagher-sentieonINDELD1_5tech_badpromoters*
97.2973
94.7368
100.0000
48.5714
1811800
bgallagher-sentieonINDELD1_5tech_badpromotershet
93.3333
87.5000
100.0000
58.8235
71700
bgallagher-sentieonINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
bgallagher-sentieonINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
bgallagher-sentieonINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9097
10100
bgallagher-sentieonINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0991
10100
bgallagher-sentieonINDELD6_15func_cds*
100.0000
100.0000
100.0000
55.2083
4304300
bgallagher-sentieonINDELD6_15func_cdshet
100.0000
100.0000
100.0000
51.6667
2902900
bgallagher-sentieonINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
bgallagher-sentieonINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1429
60600
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8571
30300
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.0392
10100
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
57.6471
3633600
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8022
40400
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3607
20200
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.8571
20200
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
94.4444
10100
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0823
7407400
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.0596
90900
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.8100
60600