PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
601-650 / 86044 show all | |||||||||||||||
| raldana-dualsentieon | INDEL | I1_5 | map_l125_m2_e0 | hetalt | 97.2973 | 94.7368 | 100.0000 | 91.9643 | 18 | 1 | 18 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | map_l125_m1_e0 | hetalt | 96.9697 | 94.1176 | 100.0000 | 91.8367 | 16 | 1 | 16 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | map_l125_m0_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 96.4286 | 3 | 1 | 3 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | map_l100_m2_e1 | hetalt | 95.3488 | 91.1111 | 100.0000 | 87.3065 | 41 | 4 | 41 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | map_l100_m2_e0 | hetalt | 95.2381 | 90.9091 | 100.0000 | 87.2204 | 40 | 4 | 40 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | map_l100_m1_e0 | hetalt | 95.2381 | 90.9091 | 100.0000 | 86.1592 | 40 | 4 | 40 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | map_l100_m0_e0 | hetalt | 94.1176 | 88.8889 | 100.0000 | 93.2203 | 8 | 1 | 8 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 95.4545 | 91.3043 | 100.0000 | 8.6957 | 21 | 2 | 21 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 98.2114 | 96.4856 | 100.0000 | 31.8284 | 302 | 11 | 302 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.9899 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 95.6731 | 91.7051 | 100.0000 | 37.4251 | 199 | 18 | 209 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | hetalt | 97.9702 | 96.0212 | 100.0000 | 40.0000 | 1086 | 45 | 1092 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.9831 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 100.0000 | 100.0000 | 100.0000 | 99.9928 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_6to10 | hetalt | 96.9005 | 93.9873 | 100.0000 | 71.9133 | 297 | 19 | 298 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 68.8645 | 52.5140 | 100.0000 | 28.5714 | 94 | 85 | 115 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 96.4344 | 93.1143 | 100.0000 | 27.8227 | 3543 | 262 | 3567 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | hetalt | 95.9223 | 92.1642 | 100.0000 | 37.2242 | 5434 | 462 | 5491 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 95.6141 | 91.5968 | 100.0000 | 29.3704 | 4371 | 401 | 4420 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | hetalt | 96.5198 | 93.2738 | 100.0000 | 24.0209 | 3758 | 271 | 3783 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | hetalt | 95.6668 | 91.6936 | 100.0000 | 25.6384 | 4261 | 386 | 4310 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | hetalt | 89.8955 | 81.6456 | 100.0000 | 37.2822 | 516 | 116 | 540 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 99.1597 | 98.3333 | 100.0000 | 80.0676 | 59 | 1 | 59 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | het | 99.8175 | 99.6357 | 100.0000 | 79.6654 | 547 | 2 | 547 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | hetalt | 96.7742 | 93.7500 | 100.0000 | 74.2015 | 105 | 7 | 105 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | het | 99.7406 | 99.4825 | 100.0000 | 76.8652 | 769 | 4 | 769 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.1538 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 99.8342 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 90.1961 | 82.1429 | 100.0000 | 59.6491 | 69 | 15 | 69 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | het | 98.3847 | 96.8208 | 100.0000 | 66.2978 | 335 | 11 | 335 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | hetalt | 95.9223 | 92.1642 | 100.0000 | 37.2242 | 5434 | 462 | 5491 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | hetalt | 96.5775 | 93.3816 | 100.0000 | 61.6574 | 5545 | 393 | 5580 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.4286 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 100.0000 | 100.0000 | 100.0000 | 99.8387 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | hetalt | 89.7357 | 81.3824 | 100.0000 | 40.5910 | 730 | 167 | 764 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | func_cds | homalt | 100.0000 | 100.0000 | 100.0000 | 29.1667 | 119 | 0 | 119 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | func_cds | hetalt | 100.0000 | 100.0000 | 100.0000 | 33.3333 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 66.6667 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 66.6667 | 2 | 0 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 69.2308 | 4 | 0 | 4 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | segdup | hetalt | 100.0000 | 100.0000 | 100.0000 | 96.6387 | 4 | 0 | 4 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | segdup | het | 100.0000 | 100.0000 | 100.0000 | 94.2308 | 24 | 0 | 24 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_siren | hetalt | 96.7742 | 93.7500 | 100.0000 | 84.0000 | 15 | 1 | 16 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l250_m2_e1 | het | 100.0000 | 100.0000 | 100.0000 | 98.3607 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l250_m2_e1 | * | 100.0000 | 100.0000 | 100.0000 | 99.2063 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l250_m2_e0 | het | 100.0000 | 100.0000 | 100.0000 | 98.3051 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l250_m2_e0 | * | 100.0000 | 100.0000 | 100.0000 | 99.1935 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l250_m1_e0 | het | 100.0000 | 100.0000 | 100.0000 | 98.2143 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l250_m1_e0 | * | 100.0000 | 100.0000 | 100.0000 | 99.1304 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | map_l150_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.6292 | 3 | 0 | 3 | 0 | 0 | ||