PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6151-6200 / 86044 show all
astatham-gatkINDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
96.9748
1801800
astatham-gatkINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
97.3366
1101100
astatham-gatkINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.9184
20200
astatham-gatkINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
96.2406
50500
astatham-gatkINDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
96.7930
2202200
astatham-gatkINDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
97.0464
1401400
astatham-gatkINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.7213
20200
astatham-gatkINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.0265
60600
astatham-gatkINDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
96.8794
2202200
astatham-gatkINDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
97.1253
1401400
astatham-gatkINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.8254
20200
astatham-gatkINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.1290
60600
astatham-gatkINDELD6_15map_sirenhetalt
97.4093
94.9495
100.0000
75.7106
9459400
astatham-gatkINDELD6_15segduphetalt
94.6237
89.7959
100.0000
90.3720
4454400
astatham-gatkINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
52.7778
1701700
astatham-gatkINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
54.5455
1001000
astatham-gatkINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
astatham-gatkINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
astatham-gatkINDELI16_PLUSHG002complexvarhet
99.2424
98.4962
100.0000
64.5705
6551063100
astatham-gatkINDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
74.4186
1111100
astatham-gatkINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
65.3846
90900
astatham-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
86.6667
20200
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
95.7576
91.8605
100.0000
78.0303
7978700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.9624
1802000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
92.1311
2402400
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.7183
99.4382
100.0000
81.2500
177117700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.5349
99.0741
100.0000
80.8044
107110500
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.2821
3503700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
85.4772
3503500
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.8152
8908900
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.4630
5305300
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
64.9123
2002000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.1579
1601600
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
96.1538
92.5926
100.0000
92.2481
2522000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
93.6937
88.1356
100.0000
73.7327
5275700
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.1034
22200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
77.7778
11200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
96.5517
93.3333
100.0000
88.8000
1411400
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
96.2963
92.8571
100.0000
60.0000
2622800
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
99.4253
98.8571
100.0000
66.6031
173217500
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
84.3750
4504500
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
93.8776
88.4615
100.0000
90.9449
2332300
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
93.0233
86.9565
100.0000
75.0000
2032300
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
100.0000
100.0000
100.0000
78.8889
3703800
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
100.0000
100.0000
100.0000
82.2222
1601600
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
65.8537
1301400
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
83.6735
80800
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
85.7143
75.0000
100.0000
75.0000
31300
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
40.0000
20300
astatham-gatkINDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
10100