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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1141 1142 1143 1144 1145 1146 1147 1148 1149 ... 1720 1721 » 57201-57250 / 86044 show all
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	3.9216	0.0000	0.0000	2	49	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*		0.0000	0.0000	66.6667	0	46	0	3	2	66.6667
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het		0.0000	0.0000	66.6667	0	8	0	3	2	66.6667
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	25	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	13	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	26	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	26	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	30	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_siren	hetalt		0.0000	0.0000	0.0000	0	31	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	9	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	*	hetalt	0.0000	62.9283	0.0000	0.0000	6447	3798	0	0	0
gduggal-snapvard	INDEL	D1_5	HG002complexvar	hetalt	0.0000	63.6095	0.0000	0.0000	860	492	0	0	0
gduggal-snapvard	INDEL	D1_5	HG002compoundhet	hetalt	0.0000	62.9699	0.0000	0.0000	6433	3783	0	0	0
gduggal-snapvard	INDEL	D1_5	decoy	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	31.2294	0.0000	0.0000	569	1253	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	66.9535	0.0000	0.0000	6224	3072	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	60.0151	0.0000	0.0000	5576	3715	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	56.5217	0.0000	0.0000	39	30	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	58.1081	0.0000	0.0000	43	31	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	54.0541	0.0000	0.0000	20	17	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	31.0612	0.0000	0.0000	401	890	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	60.7906	0.0000	0.0000	4921	3174	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	66.2224	0.0000	0.0000	4521	2306	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	60.7121	0.0000	0.0000	4962	3211	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	60.0151	0.0000	0.0000	5576	3715	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	66.8748	0.0000	0.0000	4605	2281	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	19.3483	0.0000	0.0000	95	396	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	84.6154	0	71	0	2	1	50.0000

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