PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5601-5650 / 86044 show all
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
83.3333
1201200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.7368
10100
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_diTR_51to200*
96.7742
93.7500
100.0000
97.8571
1511500
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_diTR_51to200het
94.7368
90.0000
100.0000
98.2890
91900
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.5318
60600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
83.3333
10100
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
99.9875
99.9749
100.0000
34.3760
39861398600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
92.3077
85.7143
100.0000
92.9245
3053000
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
94.3262
80800
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.5000
60600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7213
20200
bgallagher-sentieonSNPtimap_l100_m0_e0hetalt
96.2963
92.8571
100.0000
65.7895
1311300
bgallagher-sentieonSNPtimap_l100_m1_e0hetalt
98.2456
96.5517
100.0000
68.8889
2812800
bgallagher-sentieonSNPtimap_l100_m2_e0hetalt
98.3051
96.6667
100.0000
70.4082
2912900
bgallagher-sentieonSNPtimap_l100_m2_e1hetalt
98.3607
96.7742
100.0000
69.6970
3013000
bgallagher-sentieonSNPtimap_l125_m0_e0hetalt
93.3333
87.5000
100.0000
73.0769
71700
bgallagher-sentieonSNPtimap_l125_m1_e0hetalt
97.8723
95.8333
100.0000
64.0625
2312300
bgallagher-sentieonSNPtimap_l125_m2_e0hetalt
97.8723
95.8333
100.0000
70.5128
2312300
bgallagher-sentieonSNPtimap_l125_m2_e1hetalt
97.8723
95.8333
100.0000
70.5128
2312300
bgallagher-sentieonSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
84.2105
30300
bgallagher-sentieonSNPtimap_l150_m1_e0hetalt
96.5517
93.3333
100.0000
70.8333
1411400
bgallagher-sentieonSNPtimap_l150_m2_e0hetalt
96.5517
93.3333
100.0000
75.0000
1411400
bgallagher-sentieonSNPtimap_l150_m2_e1hetalt
96.5517
93.3333
100.0000
75.0000
1411400
bgallagher-sentieonSNPtimap_l250_m1_e0hetalt
85.7143
75.0000
100.0000
86.9565
31300
bgallagher-sentieonSNPtimap_l250_m2_e0hetalt
88.8889
80.0000
100.0000
84.6154
41400
bgallagher-sentieonSNPtimap_l250_m2_e1hetalt
88.8889
80.0000
100.0000
84.6154
41400
bgallagher-sentieonSNPtimap_sirenhetalt
98.2143
96.4912
100.0000
68.3908
5525500
bgallagher-sentieonSNPtisegduphetalt
100.0000
100.0000
100.0000
98.5185
20200
bgallagher-sentieonSNPtitech_badpromotershet
97.6744
95.4545
100.0000
48.1481
4224200
bgallagher-sentieonSNPtv*hetalt
99.7699
99.5408
100.0000
40.6164
867486700
bgallagher-sentieonSNPtvHG002complexvarhetalt
99.6764
99.3548
100.0000
35.9667
308230800
bgallagher-sentieonSNPtvHG002compoundhethetalt
99.7674
99.5360
100.0000
22.4231
858485800
bgallagher-sentieonSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
bgallagher-sentieonSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
24.6018
17040170400
bgallagher-sentieonSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.9045
99.8092
100.0000
64.1043
523152300
bgallagher-sentieonSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
82.3529
1211200
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
86.8421
1501500
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
45.3409
481048100
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
61.9555
786078600
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
67.4115
525052500
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
98.7654
97.5610
100.0000
91.8033
4014000
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
30300
bgallagher-sentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
86.8421
1501500
bgallagher-sentieonSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.6522
10100