PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
5351-5400 / 86044 show all | |||||||||||||||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 89.1892 | 0 | 0 | 8 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 88.5246 | 0 | 0 | 7 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 97.0588 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 96.9231 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 95.1417 | 0 | 0 | 12 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 95.4628 | 0 | 0 | 25 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 0.0000 | 0.0000 | 100.0000 | 92.4460 | 0 | 0 | 21 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_6to10 | homalt | 0.0000 | 0.0000 | 100.0000 | 89.1213 | 0 | 0 | 52 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 100.0000 | 99.9295 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 100.0000 | 99.9189 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 0.0000 | 0.0000 | 100.0000 | 85.9873 | 0 | 0 | 22 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_51to200 | * | 0.0000 | 0.0000 | 100.0000 | 88.8889 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | lowcmp_SimpleRepeat_triTR_51to200 | het | 0.0000 | 0.0000 | 100.0000 | 88.8889 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 93.4426 | 0 | 0 | 8 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l100_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 92.2018 | 0 | 0 | 17 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l100_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 92.5439 | 0 | 0 | 17 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l100_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 92.7350 | 0 | 0 | 17 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 93.7500 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.1220 | 0 | 0 | 8 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.4286 | 0 | 0 | 8 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l125_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.5556 | 0 | 0 | 8 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.0617 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.6522 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.8333 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.9732 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.6190 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.7778 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.8261 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 90.9657 | 0 | 0 | 29 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 99.0025 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | * | 0.0000 | 0.0000 | 100.0000 | 83.3333 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 100.0000 | 66.6667 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 87.5000 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 100.0000 | 85.0000 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_6to10 | homalt | 0.0000 | 0.0000 | 100.0000 | 96.1538 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_SimpleRepeat_quadTR_11to50 | homalt | 0.0000 | 0.0000 | 100.0000 | 92.5926 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 0.0000 | 0.0000 | 100.0000 | 94.4444 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_SimpleRepeat_triTR_51to200 | * | 0.0000 | 0.0000 | 100.0000 | 85.7143 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | lowcmp_SimpleRepeat_triTR_51to200 | het | 0.0000 | 0.0000 | 100.0000 | 85.7143 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 87.5000 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l100_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 90.3226 | 0 | 0 | 3 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l100_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 90.9091 | 0 | 0 | 3 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l100_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 91.1765 | 0 | 0 | 3 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 90.0000 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 90.4762 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l125_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 91.6667 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 91.6667 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 92.3077 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 93.3333 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 93.8776 | 0 | 0 | 3 | 0 | 0 | ||