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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1056 1057 1058 1059 1060 1061 1062 1063 1064 ... 1720 1721 » 52951-53000 / 86044 show all
ltrigg-rtg1	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	0.0000	0.0000	33.3333	97.9866	0	0	1	2	1	50.0000
mlin-fermikit	INDEL	D16_PLUS	map_l250_m1_e0	het	33.3333	33.3333	33.3333	94.0000	1	2	1	2	0	0.0000
mlin-fermikit	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	50.0000	100.0000	33.3333	99.9973	1	0	1	2	2	100.0000
mlin-fermikit	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	50.0000	100.0000	33.3333	99.9675	1	0	1	2	2	100.0000
qzeng-custom	INDEL	*	decoy	homalt	50.0000	100.0000	33.3333	99.8717	3	0	2	4	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	33.3333	89.6552	0	0	1	2	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	0.0000	0.0000	33.3333	97.0874	0	0	1	2	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*	0.0000	0.0000	33.3333	94.4444	0	0	1	2	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het	0.0000	0.0000	33.3333	91.4286	0	0	1	2	0	0.0000
qzeng-custom	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.0000	33.3333	70.0000	0	0	1	2	1	50.0000
qzeng-custom	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	0.0000	0.0000	33.3333	97.2222	0	0	1	2	1	50.0000
raldana-dualsentieon	INDEL	D16_PLUS	map_l250_m0_e0	*	50.0000	100.0000	33.3333	94.7368	1	0	1	2	0	0.0000
raldana-dualsentieon	INDEL	D16_PLUS	map_l250_m0_e0	het	50.0000	100.0000	33.3333	93.0233	1	0	1	2	0	0.0000
rpoplin-dv42	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	het	20.5128	14.8148	33.3333	91.0891	4	23	3	6	6	100.0000
mlin-fermikit	INDEL	I16_PLUS	map_l100_m0_e0	homalt	40.0000	50.0000	33.3333	89.6552	1	1	1	2	1	50.0000
qzeng-custom	INDEL	D16_PLUS	decoy	homalt	50.0000	100.0000	33.3333	97.8417	2	0	2	4	0	0.0000
qzeng-custom	INDEL	D16_PLUS	map_l250_m2_e0	homalt	50.0000	100.0000	33.3333	99.3697	1	0	1	2	0	0.0000
qzeng-custom	INDEL	D16_PLUS	map_l250_m2_e1	homalt	50.0000	100.0000	33.3333	99.3737	1	0	1	2	0	0.0000
qzeng-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	homalt	0.0000	0.0000	33.3333	89.2857	0	0	1	2	0	0.0000
qzeng-custom	INDEL	I16_PLUS	map_l100_m0_e0	homalt	40.0000	50.0000	33.3333	89.4737	1	1	2	4	0	0.0000
ndellapenna-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	50.0000	100.0000	33.3333	99.9972	1	0	1	2	0	0.0000
ndellapenna-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	50.0000	100.0000	33.3333	99.9731	1	0	1	2	0	0.0000
ndellapenna-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	50.0000	100.0000	33.3333	78.5714	2	0	1	2	0	0.0000
mlin-fermikit	INDEL	I1_5	HG002compoundhet	homalt	49.1644	93.9210	33.2972	76.0021	309	20	307	615	607	98.6992
ciseli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	47.3815	82.3646	33.2564	79.3607	1247	267	1297	2603	57	2.1898
jpowers-varprowl	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	46.6236	78.3459	33.1864	69.7120	521	144	527	1061	1053	99.2460
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	48.4627	89.8402	33.1807	64.3673	787	89	797	1605	1594	99.3146
anovak-vg	INDEL	I16_PLUS	HG002compoundhet	*	11.6860	7.0929	33.1593	41.3476	152	1991	127	256	126	49.2188
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.6938	0.3506	33.1551	66.3366	4	1137	124	250	96	38.4000
gduggal-snapvard	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	het	49.7817	100.0000	33.1395	82.4847	1	0	57	115	16	13.9130
ciseli-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	46.8164	79.8780	33.1115	59.9867	393	99	398	804	747	92.9104
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	30.1078	27.6176	33.0916	63.8123	364	954	365	738	734	99.4580
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	1.7852	0.9174	32.9730	66.4247	4	432	122	248	94	37.9032
anovak-vg	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	44.5986	69.2308	32.8947	40.6250	9	4	25	51	46	90.1961
gduggal-snapvard	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	49.3757	100.0000	32.7807	90.9114	3	0	692	1419	174	12.2622
gduggal-bwavard	INDEL	C16_PLUS	*	*	0.0000	0.0000	32.7485	94.0314	0	0	56	115	11	9.5652
gduggal-bwavard	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	het	46.3721	79.4421	32.7422	66.7816	769	199	757	1555	1454	93.5048
eyeh-varpipe	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	48.2780	92.0474	32.7195	37.0781	1088	94	1226	2521	2349	93.1773
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	47.3830	86.3690	32.6467	86.8151	735	116	729	1504	49	3.2580
anovak-vg	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	9.4937	5.5556	32.6087	59.8253	23	391	30	62	18	29.0323
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	0.2898	0.1456	32.5714	65.9533	1	686	57	118	47	39.8305
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	27.6434	24.0260	32.5431	70.1799	148	468	151	313	312	99.6805
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	38.1138	46.0000	32.5359	39.0671	23	27	68	141	121	85.8156
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	1.5317	0.7843	32.5163	68.9024	12	1518	199	413	192	46.4891
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	1.5317	0.7843	32.5163	68.9024	12	1518	199	413	192	46.4891
gduggal-bwavard	INDEL	C1_5	map_l150_m2_e0	het	0.0000	0.0000	32.5000	96.4093	0	0	13	27	3	11.1111
jpowers-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	46.8416	83.8718	32.4948	49.6168	3245	624	3268	6789	6766	99.6612
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	3.4141	1.8018	32.4590	68.7660	12	654	198	412	191	46.3592
gduggal-snapvard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	3.4141	1.8018	32.4590	68.7660	12	654	198	412	191	46.3592
ciseli-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	46.1538	80.0000	32.4324	96.0512	12	3	12	25	20	80.0000

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