PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
52801-52850 / 86044 show all
gduggal-bwavardINDELC6_15map_l150_m1_e0*
0.0000
0.0000
33.3333
98.2456
00120
0.0000
gduggal-bwavardINDELC6_15map_l150_m2_e0*
0.0000
0.0000
33.3333
98.4536
00120
0.0000
gduggal-bwavardINDELC6_15map_l150_m2_e1*
0.0000
0.0000
33.3333
98.4925
00120
0.0000
gduggal-bwavardINDELD16_PLUSmap_l250_m1_e0het
44.4444
66.6667
33.3333
97.1292
21241
25.0000
gduggal-bwavardINDELD16_PLUSmap_l250_m2_e0het
44.4444
66.6667
33.3333
97.4895
21241
25.0000
gduggal-bwavardINDELD16_PLUSmap_l250_m2_e1het
44.4444
66.6667
33.3333
97.5207
21241
25.0000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_51to200*
50.0000
100.0000
33.3333
95.9459
10120
0.0000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_51to200het
50.0000
100.0000
33.3333
95.2381
10120
0.0000
gduggal-snapfbINDEL*func_cdshetalt
42.8571
60.0000
33.3333
57.1429
32122
100.0000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
33.3333
68.4211
01240
0.0000
gduggal-snapfbINDELC1_5map_siren*
0.0000
0.0000
33.3333
94.8276
00120
0.0000
gduggal-snapfbINDELC1_5map_sirenhet
0.0000
0.0000
33.3333
89.2857
00120
0.0000
gduggal-snapfbINDELC6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
33.3333
96.7742
00122
100.0000
gduggal-bwafbINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
50.0000
100.0000
33.3333
99.1549
10120
0.0000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
7.1429
4.0000
33.3333
86.3636
124120
0.0000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
40.0000
50.0000
33.3333
85.0000
11120
0.0000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
33.3333
94.7368
00122
100.0000
eyeh-varpipeSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
33.3333
99.9533
00120
0.0000
eyeh-varpipeSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
33.3333
99.8458
00120
0.0000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_51to200*
50.0000
100.0000
33.3333
94.5455
10120
0.0000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_triTR_51to200het
50.0000
100.0000
33.3333
92.8571
10120
0.0000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_triTR_51to200*
50.0000
100.0000
33.3333
96.5517
10120
0.0000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_triTR_51to200het
50.0000
100.0000
33.3333
95.5882
10120
0.0000
ciseli-customINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
45.0000
69.2308
33.3333
58.4615
9491813
72.2222
ciseli-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
33.3333
33.3333
33.3333
97.4576
24243
75.0000
ciseli-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
25.6410
20.8333
33.3333
90.9091
5195109
90.0000
ciseli-customINDELI16_PLUSmap_l100_m1_e0homalt
25.0000
20.0000
33.3333
90.3226
14121
50.0000
ciseli-customINDELI16_PLUSmap_l100_m2_e0homalt
25.0000
20.0000
33.3333
91.4286
14121
50.0000
ciseli-customINDELI16_PLUSmap_l100_m2_e1homalt
25.0000
20.0000
33.3333
91.8919
14121
50.0000
ciseli-customINDELI16_PLUSsegduphet
7.4074
4.1667
33.3333
97.7778
123120
0.0000
ciseli-customSNP*map_l150_m0_e0hetalt
33.3333
33.3333
33.3333
90.9091
12121
50.0000
ciseli-customSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
44.4444
66.6667
33.3333
73.9130
42483
37.5000
ciseli-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
40.0000
50.0000
33.3333
99.4197
22242
50.0000
ciseli-customINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
33.3333
97.6378
00120
0.0000
ciseli-customINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
0.0000
33.3333
96.5909
00120
0.0000
ciseli-customINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
33.3333
97.6562
00240
0.0000
ciseli-customINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
0.0000
0.0000
33.3333
97.0874
00120
0.0000
ciseli-customINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
33.3333
96.7302
008161
6.2500
ciseli-customINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
33.3333
96.8085
00120
0.0000
ciseli-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
33.3333
96.8750
00483
37.5000
ciseli-customINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
33.3333
93.8776
00361
16.6667
ciseli-customINDELC1_5map_l100_m1_e0het
0.0000
0.0000
33.3333
99.0476
00120
0.0000
ciseli-customINDELC1_5map_l100_m2_e0het
0.0000
0.0000
33.3333
99.1329
00120
0.0000
ciseli-customINDELC1_5map_l100_m2_e1het
0.0000
0.0000
33.3333
99.1404
00120
0.0000
ciseli-customINDELC1_5map_sirenhet
0.0000
0.0000
33.3333
99.2629
00120
0.0000
ciseli-customINDELC1_5segduphet
0.0000
0.0000
33.3333
99.4286
00120
0.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
50.0000
100.0000
33.3333
94.8276
10122
100.0000
ciseli-customSNPtvmap_l150_m0_e0hetalt
33.3333
33.3333
33.3333
90.9091
12121
50.0000
ckim-dragenINDELD16_PLUSmap_l250_m0_e0*
50.0000
100.0000
33.3333
98.2456
10120
0.0000
ckim-dragenINDELD16_PLUSmap_l250_m0_e0het
50.0000
100.0000
33.3333
97.7273
10120
0.0000