PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5151-5200 / 86044 show all
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
88.8889
11100
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
87.5000
10100
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
74.2610
59.0596
100.0000
28.0702
51535712300
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
80.0000
66.6667
100.0000
99.6219
63200
gduggal-bwafbINDELD6_15map_l100_m0_e0hetalt
84.8485
73.6842
100.0000
82.6087
145400
gduggal-bwafbINDELD6_15map_l125_m1_e0hetalt
94.4444
89.4737
100.0000
90.6250
172300
gduggal-bwafbINDELD6_15map_l125_m2_e0hetalt
94.4444
89.4737
100.0000
91.4286
172300
gduggal-bwafbINDELD6_15map_l125_m2_e1hetalt
91.8919
85.0000
100.0000
92.1053
173300
gduggal-bwafbINDELD6_15map_l150_m1_e0hetalt
93.3333
87.5000
100.0000
95.6522
71100
gduggal-bwafbINDELD6_15map_l150_m2_e0hetalt
93.3333
87.5000
100.0000
95.8333
71100
gduggal-bwafbINDELD6_15map_l150_m2_e1hetalt
87.5000
77.7778
100.0000
96.1538
72100
gduggal-bwafbINDELD6_15map_l250_m0_e0homalt
66.6667
50.0000
100.0000
99.2063
11100
gduggal-bwafbINDELD6_15map_l250_m1_e0homalt
88.8889
80.0000
100.0000
97.9592
41400
gduggal-bwafbINDELD6_15map_l250_m2_e0homalt
90.9091
83.3333
100.0000
97.7273
51500
gduggal-bwafbINDELD6_15map_l250_m2_e1homalt
90.9091
83.3333
100.0000
97.7679
51500
gduggal-bwafbINDELD6_15segduphetalt
89.8876
81.6327
100.0000
90.3509
4091100
gduggal-bwafbINDELD6_15tech_badpromotershet
88.8889
80.0000
100.0000
52.6316
82900
gduggal-bwafbINDELI16_PLUSfunc_cds*
66.6667
50.0000
100.0000
50.0000
66600
gduggal-bwafbINDELI16_PLUSfunc_cdshet
61.5385
44.4444
100.0000
33.3333
45400
gduggal-bwafbINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
36.3636
22.2222
100.0000
90.0000
414100
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
22.2222
12.5000
100.0000
57.1429
321300
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
57.1429
40.0000
100.0000
68.4211
1421600
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
47.8261
31.4286
100.0000
64.5161
11241100
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
70.9677
55.0000
100.0000
53.8462
119600
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
69.2308
88800
gduggal-bwafbINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
87.5000
027200
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
57.1429
40.0000
100.0000
64.5161
691100
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
20.6897
11.5385
100.0000
75.0000
323300
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
23.0769
13.0435
100.0000
66.6667
320300
gduggal-bwafbINDELI16_PLUSmap_l100_m0_e0*
53.3333
36.3636
100.0000
83.3333
47400
gduggal-bwafbINDELI16_PLUSmap_l100_m0_e0het
54.5455
37.5000
100.0000
66.6667
35300
gduggal-bwafbINDELI16_PLUSmap_l100_m0_e0homalt
66.6667
50.0000
100.0000
92.3077
11100
gduggal-bwafbINDELI16_PLUSmap_l100_m1_e0*
37.5000
23.0769
100.0000
84.2105
620600
gduggal-bwafbINDELI16_PLUSmap_l100_m1_e0het
36.3636
22.2222
100.0000
80.0000
414400
gduggal-bwafbINDELI16_PLUSmap_l100_m1_e0homalt
57.1429
40.0000
100.0000
87.5000
23200
gduggal-bwafbINDELI16_PLUSmap_l100_m2_e0*
37.5000
23.0769
100.0000
86.3636
620600
gduggal-bwafbINDELI16_PLUSmap_l100_m2_e0het
36.3636
22.2222
100.0000
81.8182
414400
gduggal-bwafbINDELI16_PLUSmap_l100_m2_e0homalt
57.1429
40.0000
100.0000
90.0000
23200
gduggal-bwafbINDELI16_PLUSmap_l100_m2_e1*
37.5000
23.0769
100.0000
86.6667
620600
gduggal-bwafbINDELI16_PLUSmap_l100_m2_e1het
36.3636
22.2222
100.0000
82.6087
414400
gduggal-bwafbINDELI16_PLUSmap_l100_m2_e1homalt
57.1429
40.0000
100.0000
90.0000
23200
gduggal-bwafbINDELI16_PLUSmap_l125_m0_e0*
28.5714
16.6667
100.0000
95.0000
15100
gduggal-bwafbINDELI16_PLUSmap_l125_m0_e0homalt
66.6667
50.0000
100.0000
91.6667
11100
gduggal-bwafbINDELI16_PLUSmap_l125_m1_e0*
42.1053
26.6667
100.0000
87.0968
411400
gduggal-bwafbINDELI16_PLUSmap_l125_m1_e0het
50.0000
33.3333
100.0000
81.2500
36300
gduggal-bwafbINDELI16_PLUSmap_l125_m1_e0homalt
50.0000
33.3333
100.0000
92.3077
12100
gduggal-bwafbINDELI16_PLUSmap_l125_m2_e0*
42.1053
26.6667
100.0000
88.2353
411400
gduggal-bwafbINDELI16_PLUSmap_l125_m2_e0het
50.0000
33.3333
100.0000
82.3529
36300
gduggal-bwafbINDELI16_PLUSmap_l125_m2_e0homalt
50.0000
33.3333
100.0000
93.3333
12100