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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1010 1011 1012 1013 1014 1015 1016 1017 1018 ... 1720 1721 » 50651-50700 / 86044 show all
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	56.9052	57.5758	56.2500	83.0239	38	28	36	28	28	100.0000
ciseli-custom	INDEL	D6_15	map_l150_m2_e1	*	54.5455	52.9412	56.2500	93.9440	45	40	45	35	16	45.7143
ciseli-custom	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	72.0000	100.0000	56.2500	97.9408	1	0	9	7	0	0.0000
cchapple-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	0.0000	0.0000	56.2500	94.0520	0	0	9	7	2	28.5714
cchapple-custom	INDEL	C1_5	map_l125_m1_e0	het	0.0000	0.0000	56.2500	94.7798	0	0	18	14	7	50.0000
cchapple-custom	INDEL	C1_5	map_l125_m2_e0	het	0.0000	0.0000	56.2500	95.3148	0	0	18	14	7	50.0000
cchapple-custom	INDEL	C1_5	map_l125_m2_e1	het	0.0000	0.0000	56.2500	95.4155	0	0	18	14	7	50.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	homalt	72.0000	100.0000	56.2500	91.0112	9	0	9	7	0	0.0000
gduggal-bwavard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	0.0000	0.0000	56.2500	93.5135	0	0	27	21	3	14.2857
gduggal-bwavard	INDEL	C1_5	map_l100_m2_e1	*	0.0000	0.0000	56.2500	95.3466	0	0	54	42	4	9.5238
qzeng-custom	INDEL	D16_PLUS	map_l150_m2_e0	het	70.3125	93.7500	56.2500	96.6066	15	1	18	14	0	0.0000
gduggal-snapplat	INDEL	I1_5	map_l100_m2_e0	hetalt	32.3741	22.7273	56.2500	98.1352	10	34	9	7	4	57.1429
gduggal-snapplat	INDEL	I1_5	map_l100_m2_e1	hetalt	31.8584	22.2222	56.2500	98.1672	10	35	9	7	4	57.1429
gduggal-snapplat	INDEL	I1_5	tech_badpromoters	*	47.3684	40.9091	56.2500	86.0870	9	13	9	7	0	0.0000
eyeh-varpipe	INDEL	D16_PLUS	HG002compoundhet	het	53.8274	51.6049	56.2500	59.7990	209	196	45	35	35	100.0000
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	47.7873	41.5540	56.2207	53.8295	1690	2377	1681	1309	1280	97.7846
gduggal-bwavard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	34.0836	24.4547	56.2198	65.7568	953	2944	931	725	695	95.8621
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	28.2517	18.8679	56.2044	48.1061	20	86	77	60	60	100.0000
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	70.7998	95.6522	56.1983	91.6031	66	3	68	53	18	33.9623
ciseli-custom	INDEL	D6_15	map_l125_m2_e0	*	55.0607	53.9683	56.1983	92.1986	68	58	68	53	29	54.7170
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	29.6749	20.1610	56.1914	69.4731	601	2380	599	467	448	95.9315
gduggal-bwavard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	50.5742	45.9865	56.1787	51.4566	10232	12018	10138	7908	7671	97.0030
gduggal-snapfb	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	71.1247	96.9196	56.1741	75.2924	4688	149	4854	3787	159	4.1986
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	70.9064	96.1777	56.1521	58.9971	931	37	1506	1176	1140	96.9388
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	54.4885	52.9412	56.1290	51.1555	261	232	261	204	201	98.5294
gduggal-snapplat	INDEL	I1_5	HG002compoundhet	*	48.1810	42.2143	56.1120	77.8637	5216	7140	5412	4233	851	20.1039
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	52.6126	49.5308	56.1033	72.8835	475	484	478	374	353	94.3850
gduggal-snapplat	INDEL	I6_15	map_siren	het	25.8366	16.7832	56.0976	90.6818	24	119	23	18	0	0.0000
anovak-vg	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	69.4306	91.0941	56.0913	63.9073	3222	315	5258	4116	3904	94.8494
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	65.9384	80.0000	56.0811	49.8305	108	27	83	65	61	93.8462
anovak-vg	INDEL	I16_PLUS	*	het	20.3076	12.3988	56.0773	46.0104	337	2381	406	318	57	17.9245
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	56.2841	56.5217	56.0484	43.7642	130	100	139	109	101	92.6606
gduggal-snapfb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	70.7005	95.7309	56.0463	69.8866	740	33	774	607	47	7.7430
ciseli-custom	INDEL	D6_15	map_l100_m0_e0	*	52.0249	48.5437	56.0440	91.5428	50	53	51	40	23	57.5000
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	41.1230	32.4837	56.0227	78.9373	497	1033	493	387	383	98.9664
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	41.1230	32.4837	56.0227	78.9373	497	1033	493	387	383	98.9664
anovak-vg	INDEL	I1_5	map_l250_m2_e0	homalt	68.7117	88.8889	56.0000	95.0723	40	5	42	33	30	90.9091
ciseli-custom	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	70.5551	95.3826	55.9831	73.4742	1446	70	1455	1144	27	2.3601
gduggal-snapvard	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	62.5501	70.8661	55.9809	69.3548	90	37	117	92	52	56.5217
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	66.7149	82.5790	55.9638	44.4510	1332	281	5818	4578	4118	89.9519
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	37.5716	28.2822	55.9480	46.5176	1788	4534	2582	2033	1650	81.1608
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	37.5716	28.2822	55.9480	46.5176	1788	4534	2582	2033	1650	81.1608
anovak-vg	INDEL	I1_5	map_l125_m0_e0	*	57.2924	58.7097	55.9420	90.7507	182	128	193	152	98	64.4737
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	32.2728	22.6804	55.9262	35.3818	792	2700	1576	1242	1045	84.1385
ciseli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	60.2448	65.3028	55.9140	55.1447	399	212	468	369	297	80.4878
qzeng-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	71.0414	97.4522	55.8935	62.8531	153	4	147	116	4	3.4483
mlin-fermikit	INDEL	D16_PLUS	map_l100_m1_e0	*	59.8257	64.3678	55.8824	92.4500	56	31	57	45	15	33.3333
ndellapenna-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	69.6183	92.3077	55.8824	66.9903	12	1	19	15	14	93.3333
ciseli-custom	INDEL	D6_15	map_l150_m2_e0	*	54.0881	52.4390	55.8442	94.0769	43	39	43	34	16	47.0588
mlin-fermikit	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	70.2479	94.7075	55.8292	51.1236	340	19	340	269	269	100.0000

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