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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 890 891 892 893 894 895 896 897 898 ... 1720 1721 » 44651-44700 / 86044 show all
ltrigg-rtg2	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	0.0000	0.0000	89.6552	95.8865	0	0	26	3	2	66.6667
raldana-dualsentieon	INDEL	D16_PLUS	map_l125_m1_e0	*	92.8571	96.2963	89.6552	94.5386	26	1	26	3	0	0.0000
raldana-dualsentieon	INDEL	D16_PLUS	map_l125_m2_e0	*	92.8571	96.2963	89.6552	95.3451	26	1	26	3	0	0.0000
raldana-dualsentieon	INDEL	D16_PLUS	map_l125_m2_e1	*	91.2281	92.8571	89.6552	95.4474	26	2	26	3	0	0.0000
ndellapenna-hhga	INDEL	D16_PLUS	map_l125_m2_e1	*	91.2281	92.8571	89.6552	92.1622	26	2	26	3	0	0.0000
ndellapenna-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	89.1100	88.5714	89.6552	88.5827	31	4	26	3	1	33.3333
ghariani-varprowl	INDEL	I1_5	map_l150_m0_e0	het	93.6937	98.1132	89.6552	95.7571	104	2	104	12	3	25.0000
gduggal-snapfb	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	90.8187	92.0128	89.6552	50.4274	288	25	156	18	14	77.7778
eyeh-varpipe	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	90.2778	90.9091	89.6552	98.2769	10	1	26	3	3	100.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	94.5455	100.0000	89.6552	98.1931	10	0	26	3	3	100.0000
eyeh-varpipe	INDEL	D6_15	func_cds	het	89.6552	89.6552	89.6552	38.2979	26	3	26	3	3	100.0000
dgrover-gatk	INDEL	D16_PLUS	map_l125_m1_e0	*	92.8571	96.2963	89.6552	96.7885	26	1	26	3	0	0.0000
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m2_e1	*	91.2281	92.8571	89.6552	95.9270	26	2	26	3	0	0.0000
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m1_e0	*	92.8571	96.2963	89.6552	95.1667	26	1	26	3	0	0.0000
hfeng-pmm3	INDEL	D16_PLUS	map_l125_m2_e0	*	92.8571	96.2963	89.6552	95.8273	26	1	26	3	0	0.0000
cchapple-custom	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	*	94.5455	100.0000	89.6552	92.7861	1	0	26	3	1	33.3333
qzeng-custom	INDEL	*	map_l100_m2_e1	*	84.2732	79.4995	89.6568	87.9718	2986	770	3840	443	69	15.5756
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	90.9171	92.2101	89.6598	73.7675	28717	2426	29308	3380	1164	34.4379
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	90.9171	92.2101	89.6598	73.7675	28717	2426	29308	3380	1164	34.4379
gduggal-snapvard	SNP	tv	map_l125_m2_e0	*	93.1565	96.9192	89.6752	79.7699	15981	508	15929	1834	123	6.7067
jpowers-varprowl	INDEL	*	map_siren	het	92.1013	94.6539	89.6827	84.2292	4267	241	4268	491	415	84.5214
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	90.6416	91.6129	89.6907	78.8210	142	13	174	20	19	95.0000
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	84.5242	79.9191	89.6923	68.2772	593	149	583	67	46	68.6567
jlack-gatk	INDEL	*	map_l100_m2_e1	het	93.7377	98.1647	89.6927	89.8540	2300	43	2306	265	22	8.3019
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	92.0043	94.4361	89.6947	85.2186	628	37	470	54	47	87.0370
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	87.5783	85.5583	89.6959	70.2246	80809	13640	139087	15978	15625	97.7907
qzeng-custom	INDEL	*	map_l100_m2_e0	*	84.2312	79.3934	89.6968	87.9330	2932	761	3787	435	68	15.6322
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.1494	96.8783	89.6970	74.8348	931	30	888	102	92	90.1961
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.5736	100.0000	89.7059	91.4033	61	0	61	7	7	100.0000
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.5736	100.0000	89.7059	91.5106	61	0	61	7	7	100.0000
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.5736	100.0000	89.7059	91.5633	61	0	61	7	6	85.7143
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.5736	100.0000	89.7059	91.4033	61	0	61	7	7	100.0000
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.5736	100.0000	89.7059	90.0439	61	0	61	7	6	85.7143
raldana-dualsentieon	INDEL	I1_5	map_l250_m2_e0	het	91.0448	92.4242	89.7059	95.7233	61	5	61	7	0	0.0000
raldana-dualsentieon	INDEL	I1_5	map_l250_m2_e1	het	91.0448	92.4242	89.7059	95.8838	61	5	61	7	0	0.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	43.4297	28.6501	89.7059	44.7154	104	259	61	7	7	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	86.8556	84.1808	89.7059	59.6838	149	28	183	21	20	95.2381
gduggal-snapfb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	89.3383	88.9709	89.7087	51.9572	7470	926	12596	1445	343	23.7370
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	75.2854	64.8571	89.7098	61.7172	681	369	680	78	71	91.0256
jpowers-varprowl	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.4879	99.7997	89.7129	85.3011	1495	3	1500	172	100	58.1395
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	94.1029	98.9446	89.7129	61.3321	375	4	375	43	43	100.0000
ciseli-custom	SNP	*	map_l125_m2_e0	homalt	88.1697	86.6763	89.7155	68.5746	15060	2315	15013	1721	1379	80.1278
asubramanian-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	92.1502	94.7199	89.7161	77.6402	2063	115	1928	221	141	63.8009
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	89.4545	89.1929	89.7177	61.8267	27186	3294	25967	2976	2168	72.8495
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	89.4545	89.1929	89.7177	61.8267	27186	3294	25967	2976	2168	72.8495
gduggal-snapvard	SNP	tv	map_l125_m2_e1	*	93.1692	96.8962	89.7183	79.8287	16140	517	16082	1843	125	6.7824
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	42.8116	28.1132	89.7196	42.4731	149	381	96	11	10	90.9091
asubramanian-gatk	INDEL	D1_5	map_l150_m0_e0	*	90.0178	90.3114	89.7260	93.4821	261	28	262	30	2	6.6667
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	90.9744	92.2581	89.7260	80.4813	143	12	131	15	3	20.0000
ndellapenna-hhga	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	81.2239	74.1883	89.7338	67.9659	457	159	472	54	43	79.6296

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