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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 889 890 891 892 893 894 895 896 897 ... 1720 1721 » 44601-44650 / 86044 show all
eyeh-varpipe	INDEL	D6_15	map_l100_m0_e0	het	91.4037	93.3333	89.5522	86.6534	56	4	60	7	6	85.7143
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	85.9089	82.5503	89.5522	75.5027	123	26	120	14	12	85.7143
mlin-fermikit	INDEL	*	map_l250_m1_e0	het	46.6926	31.5789	89.5522	92.7095	60	130	60	7	1	14.2857
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	79.3685	71.2644	89.5522	70.7424	62	25	60	7	3	42.8571
ciseli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	94.3610	99.7108	89.5561	64.7005	1379	4	1372	160	26	16.2500
gduggal-snapfb	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	94.3491	99.6812	89.5584	44.0081	3439	11	3448	402	4	0.9950
mlin-fermikit	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	87.9424	86.3802	89.5622	71.3205	3076	485	3089	360	326	90.5556
mlin-fermikit	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*	82.7354	76.8750	89.5631	81.5825	369	111	369	43	43	100.0000
ciseli-custom	INDEL	I1_5	segdup	*	88.5870	87.6298	89.5652	93.7669	928	131	927	108	88	81.4815
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	89.3062	89.0402	89.5738	76.8026	1373	169	1366	159	137	86.1635
asubramanian-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	93.5466	97.8873	89.5745	84.0136	834	18	842	98	1	1.0204
qzeng-custom	INDEL	I1_5	HG002compoundhet	het	92.1803	94.9412	89.5755	66.2595	807	43	5740	668	571	85.4790
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	83.7918	78.7037	89.5833	87.3850	85	23	86	10	6	60.0000
ndellapenna-hhga	INDEL	D6_15	map_l100_m2_e1	hetalt	77.6313	68.4932	89.5833	74.3316	50	23	43	5	2	40.0000
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	83.8725	78.8462	89.5833	67.1233	41	11	43	5	2	40.0000
gduggal-snapfb	INDEL	D1_5	map_l250_m0_e0	*	91.4894	93.4783	89.5833	97.2650	43	3	43	5	0	0.0000
jlack-gatk	INDEL	*	map_l100_m2_e0	het	93.6860	98.1795	89.5858	89.8045	2265	42	2271	264	22	8.3333
qzeng-custom	INDEL	*	map_l100_m1_e0	*	83.9800	79.0296	89.5920	87.4621	2834	752	3667	426	66	15.4930
anovak-vg	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	92.1861	94.9340	89.5928	65.6359	9201	491	9857	1145	571	49.8690
mlin-fermikit	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	89.2733	88.9535	89.5954	83.6638	153	19	155	18	4	22.2222
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	76.0576	66.0714	89.6000	69.0594	111	57	112	13	4	30.7692
gduggal-bwavard	INDEL	*	map_siren	*	91.0727	92.5911	89.6032	84.7790	6861	549	6843	794	423	53.2746
ndellapenna-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	87.5803	85.6459	89.6040	74.6550	179	30	181	21	11	52.3810
ndellapenna-hhga	INDEL	D6_15	map_l100_m2_e0	het	93.1342	96.9466	89.6104	87.6997	127	4	138	16	8	50.0000
rpoplin-dv42	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	*	90.7895	92.0000	89.6104	65.7778	69	6	69	8	6	75.0000
gduggal-bwaplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	57.0248	41.8182	89.6104	97.1545	69	96	69	8	2	25.0000
asubramanian-gatk	INDEL	D16_PLUS	map_siren	het	90.9390	92.3077	89.6104	96.4236	72	6	69	8	1	12.5000
gduggal-bwavard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	90.2617	90.9209	89.6121	75.0082	1402	140	1363	158	97	61.3924
ghariani-varprowl	SNP	*	map_l250_m0_e0	*	92.9666	96.5808	89.6132	94.6918	2062	73	2062	239	29	12.1339
jlack-gatk	INDEL	*	map_l150_m2_e1	*	93.6441	98.0542	89.6137	92.6184	1411	28	1415	164	11	6.7073
ghariani-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	79.6846	71.7362	89.6138	68.4553	2698	1063	2692	312	233	74.6795
ghariani-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	79.6846	71.7362	89.6138	68.4553	2698	1063	2692	312	233	74.6795
gduggal-bwavard	INDEL	*	segdup	*	89.7413	89.8670	89.6160	95.3552	2297	259	2287	265	217	81.8868
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	80.9979	73.8865	89.6241	43.4171	2903	1026	2885	334	316	94.6108
jlack-gatk	INDEL	D6_15	map_l125_m2_e1	*	92.0152	94.5312	89.6296	92.3164	121	7	121	14	2	14.2857
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	70.0566	57.5000	89.6296	82.8897	115	85	121	14	5	35.7143
mlin-fermikit	INDEL	I1_5	map_l125_m1_e0	*	66.7171	53.1325	89.6341	77.6871	441	389	441	51	46	90.1961
cchapple-custom	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	76.4641	66.6667	89.6373	96.7233	2	1	346	40	5	12.5000
astatham-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.2615	97.1904	89.6378	74.6299	934	27	891	103	93	90.2913
ciseli-custom	SNP	*	map_l125_m1_e0	homalt	88.0175	86.4537	89.6388	65.9316	14615	2290	14569	1684	1350	80.1663
mlin-fermikit	INDEL	I1_5	map_l150_m2_e1	*	61.8989	47.2693	89.6429	85.3403	251	280	251	29	25	86.2069
mlin-fermikit	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	86.9120	84.3420	89.6435	36.7917	15400	2859	15390	1778	1740	97.8628
jpowers-varprowl	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	84.2056	79.3893	89.6441	65.5967	2808	729	2796	323	253	78.3282
mlin-fermikit	SNP	ti	map_siren	homalt	85.5625	81.8362	89.6443	44.4398	31029	6887	31025	3584	3486	97.2656
gduggal-snapfb	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	54.3642	39.0110	89.6450	28.3898	923	1443	303	35	34	97.1429
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	94.4249	99.7395	89.6480	70.2838	3446	9	3464	400	231	57.7500
jlack-gatk	INDEL	*	map_l150_m2_e0	*	93.7096	98.1534	89.6507	92.6142	1382	26	1386	160	9	5.6250
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	81.8133	75.2350	89.6520	58.5736	3761	1238	3942	455	448	98.4615
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	81.8133	75.2350	89.6520	58.5736	3761	1238	3942	455	448	98.4615
ltrigg-rtg1	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	0.0000	0.0000	89.6552	95.9778	0	0	26	3	2	66.6667

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