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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 820 821 822 823 824 825 826 827 828 ... 1720 1721 » 41151-41200 / 86044 show all
ckim-vqsr	INDEL	D16_PLUS	map_l100_m1_e0	het	88.7014	95.6522	82.6923	96.3989	44	2	43	9	4	44.4444
hfeng-pmm2	INDEL	D16_PLUS	map_l100_m1_e0	het	88.7014	95.6522	82.6923	94.6776	44	2	43	9	3	33.3333
asubramanian-gatk	INDEL	D16_PLUS	map_l100_m2_e1	het	85.3739	88.2353	82.6923	96.6984	45	6	43	9	2	22.2222
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m1_e0	het	88.7014	95.6522	82.6923	96.1223	44	2	43	9	4	44.4444
cchapple-custom	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	81.8131	80.9524	82.6923	99.2172	34	8	43	9	1	11.1111
mlin-fermikit	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt	89.9930	98.6928	82.7027	78.7356	151	2	153	32	31	96.8750
jpowers-varprowl	INDEL	*	*	het	88.4014	94.9432	82.7031	60.8976	184316	9817	184394	38565	37886	98.2393
qzeng-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*	76.0681	70.4167	82.7057	61.6372	338	142	1186	248	176	70.9677
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	77.3261	72.6018	82.7081	62.1191	47446	17905	52604	10998	5193	47.2177
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	77.3261	72.6018	82.7081	62.1191	47446	17905	52604	10998	5193	47.2177
gduggal-snapvard	INDEL	I1_5	map_siren	het	89.5229	97.5610	82.7085	86.5938	1640	41	1765	369	180	48.7805
ciseli-custom	SNP	tv	map_l150_m2_e1	*	76.7644	71.6136	82.7136	82.0895	8237	3265	8230	1720	402	23.3721
gduggal-bwavard	INDEL	D6_15	map_l150_m2_e0	*	82.8213	82.9268	82.7160	93.4835	68	14	67	14	10	71.4286
egarrison-hhga	INDEL	D16_PLUS	map_l100_m1_e0	*	79.1409	75.8621	82.7160	87.3635	66	21	67	14	11	78.5714
mlin-fermikit	SNP	tv	map_l150_m1_e0	*	56.0020	42.3295	82.7209	62.1223	4619	6293	4615	964	841	87.2407
astatham-gatk	INDEL	D6_15	HG002compoundhet	het	89.8182	98.2477	82.7210	68.4623	841	15	833	174	172	98.8506
asubramanian-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	89.6161	97.7492	82.7324	63.1469	304	7	436	91	90	98.9011
ciseli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	86.1694	89.8876	82.7465	54.2673	240	27	235	49	41	83.6735
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	80.7110	78.7684	82.7519	62.8376	857	231	854	178	178	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	68.1644	57.9487	82.7526	54.9804	1808	1312	475	99	96	96.9697
gduggal-snapfb	INDEL	I6_15	map_l100_m0_e0	*	77.4194	72.7273	82.7586	80.5369	24	9	24	5	4	80.0000
ghariani-varprowl	INDEL	D16_PLUS	segdup	*	80.9978	79.3103	82.7586	95.3226	46	12	48	10	8	80.0000
gduggal-snapplat	INDEL	D1_5	map_l250_m1_e0	het	80.9816	79.2793	82.7586	97.8940	88	23	96	20	5	25.0000
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	49.6165	35.4286	82.7586	60.8108	62	113	24	5	5	100.0000
egarrison-hhga	INDEL	D16_PLUS	map_l100_m0_e0	*	82.4496	82.1429	82.7586	90.9375	23	5	24	5	2	40.0000
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	90.0673	98.7902	82.7599	87.1462	2613	32	2285	476	24	5.0420
ciseli-custom	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	89.4833	97.3914	82.7630	66.8151	26956	722	27013	5626	378	6.7188
gduggal-bwavard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	*	44.1953	30.1465	82.7653	67.2461	1728	4004	1700	354	318	89.8305
jlack-gatk	SNP	tv	map_l150_m0_e0	het	89.8651	98.2765	82.7801	89.5464	2794	49	2793	581	34	5.8520
gduggal-bwavard	INDEL	D1_5	map_l100_m0_e0	het	89.9509	98.4772	82.7834	89.5125	582	9	577	120	17	14.1667
gduggal-bwavard	INDEL	I1_5	map_l150_m0_e0	het	89.0022	96.2264	82.7869	94.8975	102	4	101	21	4	19.0476
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	88.0000	93.9024	82.7957	75.9690	77	5	77	16	16	100.0000
jlack-gatk	INDEL	D1_5	map_l150_m0_e0	*	89.7284	97.9239	82.7988	93.2798	283	6	284	59	1	1.6949
gduggal-bwavard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	85.8503	89.1304	82.8031	86.0652	984	120	963	200	61	30.5000
gduggal-snapplat	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	80.6495	78.6024	82.8061	85.2794	3802	1035	3848	799	94	11.7647
eyeh-varpipe	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	82.8070	95.5800	0	0	236	49	46	93.8776
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	70.1987	60.9195	82.8125	80.6647	53	34	53	11	8	72.7273
ghariani-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	81.0304	79.3233	82.8125	82.8188	211	55	212	44	39	88.6364
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e0	het	81.0385	79.3388	82.8125	97.9338	96	25	106	22	5	22.7273
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	75.5515	69.4611	82.8125	75.1938	116	51	53	11	10	90.9091
ciseli-custom	INDEL	I1_5	map_l100_m2_e0	homalt	54.2174	40.3013	82.8125	83.8994	214	317	212	44	35	79.5455
mlin-fermikit	INDEL	I1_5	map_l125_m2_e0	homalt	71.0218	62.1701	82.8125	78.5774	212	129	212	44	42	95.4545
ndellapenna-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	70.1987	60.9195	82.8125	82.7957	53	34	53	11	5	45.4545
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	87.3821	92.4855	82.8125	68.7551	320	26	318	66	63	95.4545
gduggal-snapfb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	89.1553	96.5499	82.8127	57.5437	5485	196	5488	1139	1055	92.6251
anovak-vg	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	63.7080	51.7647	82.8154	52.5585	440	410	453	94	66	70.2128
dgrover-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	86.7725	91.1111	82.8283	95.1111	82	8	82	17	4	23.5294
raldana-dualsentieon	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	80.2236	77.7778	82.8283	72.1910	105	30	82	17	16	94.1176
mlin-fermikit	INDEL	D6_15	map_l125_m1_e0	*	74.9115	68.3761	82.8283	83.9286	80	37	82	17	11	64.7059
eyeh-varpipe	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	86.6959	90.9333	82.8358	66.4682	2728	272	3219	667	620	92.9535

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