PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
3301-3350 / 86044 show all
gduggal-snapfbINDEL*decoyhetalt
100.0000
100.0000
10000
gduggal-snapfbINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
33.3333
100.0000
12000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
33.3333
100.0000
12000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
03000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
02000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDEL*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5HG002compoundhethomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5decoy*
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5decoyhet
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5decoyhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5func_cds*
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5func_cdshet
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5map_l100_m0_e0*
0.0000
100.0000
00000
gduggal-snapfbINDELC1_5map_l100_m0_e0het
0.0000
100.0000
00000