PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
27851-27900 / 86044 show all
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
81.1111
000178
47.0588
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
0.0000
98.3871
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e0homalt
0.0000
0.0000
98.4848
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
0.0000
98.5075
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
0.0000
97.2222
00011
100.0000
eyeh-varpipeINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00011
100.0000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5**
0.0000
90.0000
0.0000
0.0000
91000
dgrover-gatkINDELC1_5*het
0.0000
88.8889
0.0000
0.0000
81000
dgrover-gatkINDELC1_5*hetalt
0.0000
100.0000
0.0000
0.0000
10000
dgrover-gatkINDELC1_5*homalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5HG002complexvar*
0.0000
85.7143
0.0000
0.0000
61000
dgrover-gatkINDELC1_5HG002complexvarhet
0.0000
85.7143
0.0000
0.0000
61000
dgrover-gatkINDELC1_5HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5HG002complexvarhomalt
0.0000
0.0000
0.0000
00000